RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 GPR1P46091 355 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PTPN5P54829 565 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 IL2P60568 153 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MRPS22P82650 360 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MS4A2Q01362 244 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GAS6Q14393 721 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GK5Q6ZS86 529 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 VRK3Q8IV63 474 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DSELQ8IZU8 1212 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CACTIN-AS1Q8N1I8 211 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FBXW8Q8N3Y1 598 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TRAM1L1Q8N609 369 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RP9Q8TA86 221 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 HMGB4Q8WW32 186 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZSCAN5AQ9BUG6 496 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZBTB26Q9HCK0 441 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DMDP11532 3685 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3DA0A087WVF3 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3EA0A087X179 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3KA0A087X1G2 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TCRBV21S2A2A0A5A6 115 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3FA6NER0 549 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3LB9A6J9 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 H0Y858 1186 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TXNDC9O14530 226 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ADH1BP00325 375 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3HP0C7X1 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DCDC1P59894 354 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 HERVK_113P63132 956 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CREB5Q02930 508 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 BOP1Q14137 746 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 WSCD2Q2TBF2 565 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GRAMD1BQ3KR37 738 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TMEM52BQ4KMG9 183 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3GQ6DHY5 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3CQ6IPX1 549 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D3Q8IZP1 549 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NCSTNQ92542 709 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FOXJ1Q92949 421 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DCUN1D1Q96GG9 259 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FAR2Q96K12 515 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NSUN5Q96P11 429 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ERVK-6Q9BXR3 956 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SYTL2Q9HCH5 934 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MID1IP1Q9NPA3 183 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CCDC167Q9P0B6 97 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OR1A2Q9Y585 309 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PCDHB1Q9Y5F3 818 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SPEGQ15772 3267 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 IGLV3-16A0A075B6K0 115 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 C9JVG2 144 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 H3BNX3 289 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 UBDO15205 165 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MTHFD2P13995 350 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MSH3P20585 1137 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PBLDP30039 288 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ACSL1P33121 698 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 HK3P52790 923 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TMEM115Q12893 351 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MLF2Q15773 248 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 C18orf21Q32NC0 220 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MMEL1Q495T6 779 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 UNC50Q53HI1 259 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZDHHC20Q5W0Z9 365 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DOK6Q6PKX4 331 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 C16orf89Q6UX73 402 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MACC1Q6ZN28 852 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FRMD1Q8N878 549 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TRPC4APQ8TEL6 797 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 OR2AG1Q9H205 316 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KNL1Q8NG31 2342 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 WDR87Q6ZQQ6 2873 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SCAMP1O15126 338 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RAD51BO15315 384 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SLC31A1O15431 190 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CHRNB1P11230 501 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RPS3P23396 243 aaKnown RBP eCLIP12.42□□□□□ -0.423e-10■■□□□ 13.8
CDK5RAP3-217ENST00000580287 PXNP49023 591 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MTTPP55157 894 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PPP2CBP62714 309 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PPP2CAP67775 309 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 UBXN2BQ14CS0 331 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CRY1Q16526 586 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DDIASQ8IXT1 998 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FBXO39Q8N4B4 442 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MAFAQ8NHW3 353 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DLG3Q92796 817 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 C19orf43Q9BQ61 176 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PIF1Q9H611 641 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CAAP1Q9H8G2 361 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LMAN1LQ9HAT1 526 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SEMA4BQ9NPR2 832 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SLC2A4RGQ9NR83 387 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GMPR2Q9P2T1 348 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GIMAP2Q9UG22 337 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CIDEBQ9UHD4 219 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PTGDR2Q9Y5Y4 395 aa12.42□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TRPM6Q9BX84 2022 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms