RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 STAT6P42226 847 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 ATP5OP48047 213 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TRPC1P48995 793 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SERPINH1P50454 418 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 MXI1P50539 228 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 GPR143P51810 404 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 HILS1P60008 231 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 GPC5P78333 572 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 MRPS34P82930 218 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 COG7P83436 770 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 BEX3Q00994 111 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 ITIH3Q06033 890 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 GPM6BQ13491 265 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 CUL2Q13617 745 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TSTA3Q13630 321 aaPredicted RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 MAPK11Q15759 364 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 CYP2A13Q16696 494 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 IMMTQ16891 758 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 PLK5Q496M5 336 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 CDONQ4KMG0 1287 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 FILIP1LQ4L180 1135 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 HERC4Q5GLZ8 1057 aaPredicted RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SPATA46Q5T0L3 261 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF618Q5T7W0 954 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 VWA5B1Q5TIE3 1220 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TMEM198Q66K66 360 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SLC27A1Q6PCB7 646 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 C16orf87Q6PH81 154 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 FAM198BQ6UWH4 519 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 NHLRC1Q6VVB1 395 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TRIM72Q6ZMU5 477 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF782Q6ZMW2 699 aaPredicted RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 MTSS1LQ765P7 747 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 YTHDF3Q7Z739 585 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 KLBQ86Z14 1044 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 UNC5CLQ8IV45 518 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 FBXO39Q8N4B4 442 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 EXD1Q8NHP7 514 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 LRRC8CQ8TDW0 803 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TRPC4APQ8TEL6 797 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 LPIN2Q92539 896 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 NSMAFQ92636 917 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 CASP10Q92851 521 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SNRNP40Q96DI7 357 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 CFAP36Q96G28 342 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 BOD1Q96IK1 185 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 CNOT6LQ96LI5 555 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 ADAD1Q96M93 576 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SLITRK1Q96PX8 696 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 FRG2BQ96QU4 278 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 PRR25Q96S07 402 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SMC6Q96SB8 1091 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 NEU1Q99519 415 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 ZSWIM1Q9BR11 485 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 WDR83Q9BRX9 315 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 C1QTNF5Q9BXJ0 243 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SPRTNQ9H040 489 aaPredicted RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 FZD8Q9H461 694 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TFB2MQ9H5Q4 396 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SRD5A3Q9H8P0 318 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 GPN1Q9HCN4 374 aaPredicted RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 GALNT9Q9HCQ5 603 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TRPV5Q9NQA5 729 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TMEM74BQ9NUR3 256 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 PRMT7Q9NVM4 692 aaPredicted RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TMOD3Q9NYL9 352 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 CLIP2Q9UDT6 1046 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 PLEKHA6Q9Y2H5 1048 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SNX9Q9Y5X1 595 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.07□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF541Q9H0D2 1346 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 TNS2Q63HR2 1409 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 A2MP01023 1474 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 PLXNC1O60486 1568 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 MAST1Q9Y2H9 1570 aa3.07□□□□□ -1.92
KPNB1-208ENST00000580019 A0A0B4J203 849 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 C1orf226A1L170 272 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 TARSL2A2RTX5 802 aaKnown RBP3.06□□□□□ -1.92
KPNB1-208ENST00000580019 TYW5A2RUC4 315 aaKnown RBP3.06□□□□□ -1.92
KPNB1-208ENST00000580019 ZSCAN5CA6NGD5 496 aaPredicted RBP3.06□□□□□ -1.92
KPNB1-208ENST00000580019 CBY3A6NI87 242 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 LRRIQ4A6NIV6 560 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 FAM157AC9JC47 383 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 AP4M1O00189 453 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 E2F3O00716 465 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 TO15178 435 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 ST8SIA3O43173 380 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 PEX1O43933 1283 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 SELENOFO60613 162 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 PRAMEF2O60811 474 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 SPAG6O75602 509 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 EPN2O95208 641 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 NSD2O96028 1365 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 AK1P00568 194 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 GH2P01242 217 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 KRT6BP04259 564 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 ELANEP08246 267 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 NR2F2P24468 414 aa3.06□□□□□ -1.92
KPNB1-208ENST00000580019 ACP1P24666 158 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms