RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 SIDT2Q8NBJ9 832 aaKnown RBP13.55□□□□□ -0.24
RNF43-202ENST00000577625 COG8Q96MW5 612 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 ELOVL2Q9NXB9 296 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 PTBP2Q9UKA9 531 aaKnown RBP13.55□□□□□ -0.24
RNF43-202ENST00000577625 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 TRIM64BA6NI03 449 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 E5RI56 91 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 TSPAN12O95859 305 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 ZNF7P17097 686 aaPredicted RBP13.55□□□□□ -0.24
RNF43-202ENST00000577625 CHRM3P20309 590 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 ACRV1P26436 265 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 DCKP27707 260 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 ARSIQ5FYB1 569 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 FAM209AQ5JX71 171 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 RBFAQ8N0V3 343 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 TMEM102Q8N9M5 508 aaPredicted RBP13.55□□□□□ -0.24
RNF43-202ENST00000577625 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 BOCQ9BWV1 1114 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 NSUN3Q9H649 340 aaKnown RBP13.55□□□□□ -0.24
RNF43-202ENST00000577625 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 CDC14AQ9UNH5 594 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 IFT52Q9Y366 437 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 GOLGA8CPA6NN73 597 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 AGAP14A8MT82 685 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 IQCF5A8MTL0 148 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 UBXN8O00124 270 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 SUPT7LO94864 414 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 COX4I1P13073 169 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 CLCN7P51798 805 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 IL2P60568 153 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 POLR2LP62875 67 aaKnown RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 E2F2Q14209 437 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 OXA1LQ15070 435 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 PDGFRLQ15198 375 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 UNC50Q53HI1 259 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 RFLNAQ6ZTI6 216 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 CUZD1Q86UP6 607 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 PTGR2Q8N8N7 351 aaPredicted RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 ANKK1Q8NFD2 765 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 EXT2Q93063 718 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 FAR2Q96K12 515 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 CLPBQ9H078 707 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 WDR55Q9H6Y2 383 aaPredicted RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 QPCTLQ9NXS2 382 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 GTSE1Q9NYZ3 720 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 RNF112Q9ULX5 631 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 DHRS7Q9Y394 339 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 C7orf72A4D263 438 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 TRPC5OSA6NMA1 111 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 SYCE1LA8MT33 242 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 TMEM233B4DJY2 109 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 KLHL41O60662 606 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 NCF2P19878 526 aaPredicted RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 RCVRNP35243 200 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 FCHO2Q0JRZ9 810 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 ITGADQ13349 1161 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 TSNQ15631 228 aaKnown RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 LSM12Q3MHD2 195 aaKnown RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 ANKRD26P1Q6NSI1 321 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 RPS27LQ71UM5 84 aaKnown RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 RAB44Q7Z6P3 723 aaPredicted RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 SFTPA1Q8IWL2 248 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 NXPE1Q8N323 547 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 AFAP1L2Q8N4X5 818 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 SLC15A4Q8N697 577 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 MINDY2Q8NBR6 621 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 TIFAQ96CG3 184 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 ASB2Q96Q27 587 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 MYADMQ96S97 322 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 MROQ9BYG7 248 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 RIC8BQ9NVN3 520 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
RNF43-202ENST00000577625 CRLS1Q9UJA2 301 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 CDYLQ9Y232 598 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 PRSS21Q9Y6M0 314 aa13.54□□□□□ -0.24
RNF43-202ENST00000577625 GOLGA8QA0A0J9YX86 632 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 LOC100653049A0A140TA62 436 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 A0A1W2PPW3 197 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 GOLGA8OA6NCC3 632 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 UPK3BL1B0FP48 263 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 UPK3BL2E5RIL1 263 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 GOLGA8NF8WBI6 632 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 J3QRK9 145 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 CDC7O00311 574 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 NEMP1O14524 444 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 KRT34O76011 436 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 RSL1D1O76021 490 aaKnown RBP13.53□□□□□ -0.24
RNF43-202ENST00000577625 JUNP05412 331 aaKnown RBP13.53□□□□□ -0.24
RNF43-202ENST00000577625 ALOX5P09917 674 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 EPHA3P29320 983 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 SPINT3P49223 89 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
RNF43-202ENST00000577625 SF3B4Q15427 424 aaKnown RBP eCLIP13.53□□□□□ -0.242e-6■■□□□ 14.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms