RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 HSP90AB4PQ58FF6 505 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 Q6ZSR9 355 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 IKBIPQ70UQ0 350 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 INTS8Q75QN2 995 aaKnown RBP2.12□□□□□ -2.07
TOP2A-202ENST00000577541 CHST9Q7L1S5 443 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 PIGZQ86VD9 579 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 PDILTQ8N807 584 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 MAPKAPK5-AS1Q8N8E1 139 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 ZNF383Q8NA42 475 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 PRSS33Q8NF86 280 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 OR5AP2Q8NGF4 316 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 OR1J1Q8NGS3 322 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 ERLEC1Q96DZ1 483 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 MTERF3Q96E29 417 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 OR6C1Q96RD1 312 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 LAT2Q9GZY6 243 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 DNAJC18Q9H819 358 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 INTS9Q9NV88 658 aaKnown RBP2.12□□□□□ -2.07
TOP2A-202ENST00000577541 WSB2Q9NYS7 404 aaPredicted RBP2.12□□□□□ -2.07
TOP2A-202ENST00000577541 AASSQ9UDR5 926 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 ZDHHC2Q9UIJ5 367 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 WBP11Q9Y2W2 641 aaKnown RBP2.12□□□□□ -2.07
TOP2A-202ENST00000577541 SPIN1Q9Y657 262 aaPredicted RBP2.12□□□□□ -2.07
TOP2A-202ENST00000577541 RUSC2Q8N2Y8 1516 aa2.12□□□□□ -2.07
TOP2A-202ENST00000577541 A0A1W2PRB8 838 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 HEPACAM2A8MVW5 462 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 PRKRAO75569 313 aaKnown RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 TRMUO75648 421 aaKnown RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 WDHD1O75717 1129 aaPredicted RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 RSL1D1O76021 490 aaKnown RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 RB1P06400 928 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 HMBSP08397 361 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 GATA1P15976 413 aaPredicted RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 MAPK4P31152 587 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 TLX1P31314 330 aaPredicted RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 ACSL1P33121 698 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 PPARGP37231 505 aaPredicted RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 PNLIPRP2P54317 469 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 HERV-K104P61576 105 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 SIRPAP78324 504 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 KCNC3Q14003 757 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 TAF13Q15543 124 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 GLIPR1L2Q4G1C9 344 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 DCAF10Q5QP82 559 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 KRT79Q5XKE5 535 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 CCDC70Q6NSX1 233 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 TEX11Q8IYF3 940 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 DCLK2Q8N568 766 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 TRIML1Q8N9V2 468 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 OR2T6Q8NHC8 308 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 RNF128Q8TEB7 428 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 NSMCE3Q96MG7 304 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 NEK1Q96PY6 1258 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 C16orf70Q9BSU1 422 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 CABLES2Q9BTV7 478 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 SDR39U1Q9NRG7 319 aaPredicted RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 INTS10Q9NVR2 710 aaKnown RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 IRAK4Q9NWZ3 460 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 RHCGQ9UBD6 479 aa2.11□□□□□ -2.07
TOP2A-202ENST00000577541 SEC63Q9UGP8 760 aaKnown RBP2.11□□□□□ -2.07
TOP2A-202ENST00000577541 IGLV7-46A0A075B6I9 117 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 ZNF197O14709 1029 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 SSX4O60224 188 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 DFFBO76075 338 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 SORBS2O94875 1100 aaKnown RBP2.1□□□□□ -2.07
TOP2A-202ENST00000577541 MBD4O95243 580 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 WDPCPO95876 746 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 VTNP04004 478 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 MMP9P14780 707 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 TNFAIP3P21580 790 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 SUOXP51687 545 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 ARSEP51690 589 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 CDH11P55287 796 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 CX3CL1P78423 397 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 IRF3Q14653 427 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 DLG2Q15700 870 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 SNAI3Q3KNW1 292 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 FAM98BQ52LJ0 330 aaKnown RBP2.1□□□□□ -2.07
TOP2A-202ENST00000577541 MDH1BQ5I0G3 518 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 PLEKHS1Q5SXH7 462 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 CYP4A22Q5TCH4 519 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 CORO6Q6QEF8 472 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 FIP1L1Q6UN15 594 aaKnown RBP2.1□□□□□ -2.07
TOP2A-202ENST00000577541 IL27RAQ6UWB1 636 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 TMEM143Q96AN5 459 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 FAM81BQ96LP2 452 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 FOXN4Q96NZ1 517 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 PKP2Q99959 881 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 VGLL1Q99990 258 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 TREX2Q9BQ50 279 aaPredicted RBP2.1□□□□□ -2.07
TOP2A-202ENST00000577541 SRSF8Q9BRL6 282 aaKnown RBP2.1□□□□□ -2.07
TOP2A-202ENST00000577541 RTN4RQ9BZR6 473 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 KCNK15Q9H427 330 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 TAB2Q9NYJ8 693 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 ERAP1Q9NZ08 941 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 PTTG2Q9NZH5 202 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 LARSQ9P2J5 1176 aaKnown RBP2.1□□□□□ -2.07
TOP2A-202ENST00000577541 MTUS1Q9ULD2 1270 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 GRID1Q9ULK0 1009 aa2.1□□□□□ -2.07
TOP2A-202ENST00000577541 GRIP1Q9Y3R0 1128 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms