RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 RMDN1Q96DB5 314 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PGAP3Q96FM1 320 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 NSL1Q96IY1 281 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ST6GAL2Q96JF0 529 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 INPP4AQ96PE3 977 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 DUX3Q96PT4 197 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 SLC25A23Q9BV35 468 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 TRMT61BQ9BVS5 477 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 FNDC11Q9BVV2 318 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ANKRD2Q9GZV1 360 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 MMP28Q9H239 520 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 VPS33BQ9H267 617 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 PPIL3Q9H2H8 161 aaKnown RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 TRPC7Q9HCX4 862 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 ZNF334Q9HCZ1 680 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 C5AR2Q9P296 337 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 KLHL9Q9P2J3 617 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 CRNNQ9UBG3 495 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 FAF1Q9UNN5 650 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 JRKLQ9Y4A0 524 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 CCL27Q9Y4X3 112 aa2.39□□□□□ -2.03
COPS3-213ENST00000577210 SOS1Q07889 1333 aaPredicted RBP2.39□□□□□ -2.03
COPS3-213ENST00000577210 PRSS51A0A1B0GVH4 220 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 A8MXE2 369 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 SLCO1B7G3V0H7 640 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 P2RY10O00398 339 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 WDR46O15213 610 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 CREG1O75629 220 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 PIGNO95427 931 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 BCL10O95999 233 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 DANCRP0C864 163 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 RNF224P0DH78 156 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 SAGP10523 405 aaPredicted RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 PLA2G2AP14555 144 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 CKMT2P17540 419 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 GNAZP19086 355 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 MUTP22033 750 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 PSMA3P25788 255 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 BRWD1-AS2P59051 145 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 ILF3Q12906 894 aaKnown RBP eCLIP2.38□□□□□ -2.03
COPS3-213ENST00000577210 PPP2R5CQ13362 524 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 TNIP1Q15025 636 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 LETM2Q2VYF4 491 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 PDLIM3Q53GG5 364 aaPredicted RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 C6orf163Q5TEZ5 329 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 SFMBT2Q5VUG0 894 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 PLA2G4FQ68DD2 849 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 TMEM211Q6ICI0 200 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 SLC35E4Q6ICL7 350 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 FIGLAQ6QHK4 219 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 C19orf48Q6RUI8 117 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 ERN2Q76MJ5 926 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 ATG9AQ7Z3C6 839 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 DSG4Q86SJ6 1040 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 PHLDB2Q86SQ0 1253 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 SLC9B2Q86UD5 537 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 IQCA1Q86XH1 822 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 PLD3Q8IV08 490 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 DCUN1D3Q8IWE4 304 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 ZNF611Q8N823 705 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 ZNF713Q8N859 430 aaPredicted RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 TDRD5Q8NAT2 981 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 RBM15BQ8NDT2 890 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 GRAPLQ8TC17 118 aaPredicted RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 TAS1R2Q8TE23 839 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 ZNF473Q8WTR7 871 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 DAZLQ92904 295 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 DHX58Q96C10 678 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 SIPA1Q96FS4 1042 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 C17orf77Q96MU5 243 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 JAKMIP1Q96N16 626 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 LRRC3BQ96PB8 259 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 PKP4Q99569 1192 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 ADPGKQ9BRR6 497 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 FAM129AQ9BZQ8 928 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 CSTL1Q9H114 145 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 TFB2MQ9H5Q4 396 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 NPAP1Q9NZP6 1156 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 TAAR2Q9P1P5 351 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 TUBE1Q9UJT0 475 aa2.38□□□□□ -2.03
COPS3-213ENST00000577210 CPSF3Q9UKF6 684 aaKnown RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 SPIN1Q9Y657 262 aaPredicted RBP2.38□□□□□ -2.03
COPS3-213ENST00000577210 HYKKA2RU49 373 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 CLDN4O14493 209 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 XRCC3O43542 346 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 TADA2AO75478 443 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 PRKRAO75569 313 aaKnown RBP2.37□□□□□ -2.03
COPS3-213ENST00000577210 TGDSO95455 350 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 NR3C1P04150 777 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 EDN1P05305 212 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 QDPRP09417 244 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 RAB40ALP0C0E4 278 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 IGHV4-38-2P0DP08 117 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 SCG2P13521 617 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 CA6P23280 308 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 CPT2P23786 658 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 MT3P25713 68 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 CTNNA1P35221 906 aaKnown RBP2.37□□□□□ -2.03
COPS3-213ENST00000577210 CDKN1AP38936 164 aa2.37□□□□□ -2.03
COPS3-213ENST00000577210 RAD23AP54725 363 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms