RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 KCNMB4Q86W47 210 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 LMNTD2Q8IXW0 634 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 OR5K2Q8NHB8 316 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 FAM136AQ96C01 138 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 CD180Q99467 661 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 MAP3K3Q99759 626 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 FAM167BQ9BTA0 163 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 NAT9Q9BTE0 207 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 ASPSCR1Q9BZE9 553 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 TFB2MQ9H5Q4 396 aaKnown RBP20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 XKR8Q9H6D3 395 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 FBXO6Q9NRD1 293 aaPredicted RBP20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 CDYLQ9Y232 598 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 PCDHGA3Q9Y5H0 932 aa20.13■□□□□ 0.81
HCFC1R1-208ENST00000575214 GSAPA4D1B5 854 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 TLCD2A6NGC4 264 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 NDC80O14777 642 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 RAD51CO43502 376 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 NIPSNAP2O75323 286 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 S1PR4O95977 384 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 CD82P27701 267 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 SLC1A2P43004 574 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 RPL21P46778 160 aaKnown RBP20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 TLE3Q04726 772 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 FOXM1Q08050 763 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 ABRQ12979 859 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 HSP90AA5PQ58FG0 334 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 ZNF789Q5FWF6 425 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 HP1BP3Q5SSJ5 553 aaPredicted RBP20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 BROXQ5VW32 411 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 AMIGO1Q86WK6 493 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 ZFAND4Q86XD8 727 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 UNC5BQ8IZJ1 945 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 CFAP61Q8NHU2 1237 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 UBXN4Q92575 508 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 NRTNQ99748 197 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 CTRCQ99895 268 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 IARS2Q9NSE4 1012 aaKnown RBP20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 SIDT1Q9NXL6 827 aaKnown RBP20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 POLG2Q9UHN1 485 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 CHMP2BQ9UQN3 213 aa20.12■□□□□ 0.81
HCFC1R1-208ENST00000575214 IGHV5-51A0A0C4DH38 117 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 E5RI56 91 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 MATN2O00339 956 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 SLCO2B1O94956 709 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 LIPCP11150 499 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 PKMP14618 531 aaKnown RBP20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 CHRM3P20309 590 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 ELK3P41970 407 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 KPNA2P52292 529 aaKnown RBP20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 CLN3Q13286 438 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 SPANXN3Q5MJ09 141 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 PLEKHS1Q5SXH7 462 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 CEACAM20Q6UY09 585 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 IGDCC3Q8IVU1 814 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 BBOF1Q8ND07 529 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 SKA2Q8WVK7 121 aaPredicted RBP20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 KLHL6Q8WZ60 621 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 ZNF592Q92610 1267 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 CFAP36Q96G28 342 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 TEFMQ96QE5 360 aaKnown RBP20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 CCDC68Q9H2F9 335 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 DPH5Q9H2P9 285 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 APMAPQ9HDC9 416 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 FBXO8Q9NRD0 319 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 FBXO5Q9UKT4 447 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 ICKQ9UPZ9 632 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 PCDHB11Q9Y5F2 797 aa20.11■□□□□ 0.81
HCFC1R1-208ENST00000575214 LAMA5O15230 3695 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 BTN3A3O00478 584 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 BTN3A1O00481 513 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 POLR1CO15160 346 aaPredicted RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 KDM1AO60341 852 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 URI1O94763 535 aaPredicted RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 RPN2P04844 631 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 ERVK-10P10266 1014 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 NELFEP18615 380 aaKnown RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 SHMT2P34897 504 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 ARL4DP49703 201 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 SH3BP2P78314 561 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 MPP1Q00013 466 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 CKAP4Q07065 602 aaKnown RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 CALCOCO2Q13137 446 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 SIDT2Q8NBJ9 832 aaKnown RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 GABPB2Q8TAK5 448 aaPredicted RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 LRRC39Q96DD0 335 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 ERP44Q9BS26 406 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 SEMA5BQ9P283 1151 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 ZC3H7BQ9UGR2 993 aaKnown RBP20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 CDC23Q9UJX2 597 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 POMT2Q9UKY4 750 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 PLAGL1Q9UM63 463 aa20.1■□□□□ 0.81
HCFC1R1-208ENST00000575214 STMND1H3BQB6 276 aa20.09■□□□□ 0.81
HCFC1R1-208ENST00000575214 CDH3P22223 829 aa20.09■□□□□ 0.81
HCFC1R1-208ENST00000575214 TGIF1Q15583 401 aa20.09■□□□□ 0.81
HCFC1R1-208ENST00000575214 UNC5DQ6UXZ4 953 aa20.09■□□□□ 0.81
HCFC1R1-208ENST00000575214 DCUN1D3Q8IWE4 304 aa20.09■□□□□ 0.81
HCFC1R1-208ENST00000575214 CRELD1Q96HD1 420 aa20.09■□□□□ 0.81
HCFC1R1-208ENST00000575214 OR6C1Q96RD1 312 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms