RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 SMPD3Q9NY59 655 aaPredicted RBP4.85□□□□□ -1.63
TSR1-203ENST00000575049 OR6C3Q9NZP0 311 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 C6orf203Q9P0P8 240 aaPredicted RBP4.85□□□□□ -1.63
TSR1-203ENST00000575049 KCNN3Q9UGI6 736 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 CEPT1Q9Y6K0 416 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.85□□□□□ -1.63
TSR1-203ENST00000575049 ZNF804BA4D1E1 1349 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 UBE4BO95155 1302 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 WDR19Q8NEZ3 1342 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 RPAP1Q9BWH6 1393 aaPredicted RBP4.85□□□□□ -1.63
TSR1-203ENST00000575049 RGS12O14924 1447 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 CPSF1Q10570 1443 aaKnown RBP4.85□□□□□ -1.63
TSR1-203ENST00000575049 ATP10DQ9P241 1426 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 EFCAB6Q5THR3 1501 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 TULP4Q9NRJ4 1543 aa4.85□□□□□ -1.63
TSR1-203ENST00000575049 QRICH2Q9H0J4 1663 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 MROH1Q8NDA8 1641 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 TMEM94Q12767 1356 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 ZNF541Q9H0D2 1346 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 ARHGAP42A6NI28 874 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 FOXO6A8MYZ6 492 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 NUDT21O43809 227 aaKnown RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 NEMFO60524 1076 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 ZNF821O75541 412 aaPredicted RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 JRKO75564 520 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 TOMM70O94826 608 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 KRT6BP04259 564 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 AZGP1P25311 298 aaKnown RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 HOXD9P28356 352 aaPredicted RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 CCND3P30281 292 aaPredicted RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 IDUAP35475 653 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 SSR1P43307 286 aaKnown RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 KRT6CP48668 564 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 GMPSP49915 693 aaPredicted RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 HTR6P50406 440 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CLCNKAP51800 687 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 HNRNPKP61978 463 aaKnown RBP eCLIP4.84□□□□□ -1.63
TSR1-203ENST00000575049 UBE2HP62256 183 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 GRIK3Q13003 919 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 SPP2Q13103 211 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 PDE7AQ13946 482 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CYP1B1Q16678 543 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 USP41Q3LFD5 358 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 KCTD21Q4G0X4 260 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 ATAD3BQ5T9A4 648 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 HIST2H2BDQ6DRA6 164 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 LRRC8EQ6NSJ5 796 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CEP85Q6P2H3 762 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 ANKRD16Q6P6B7 361 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 VWA1Q6PCB0 445 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CES3Q6UWW8 571 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 QSOX2Q6ZRP7 698 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 DET1Q7L5Y6 550 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 MAVSQ7Z434 540 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 ADAMTSL2Q86TH1 951 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 VASH2Q86V25 355 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 WDR5BQ86VZ2 330 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 RFX6Q8HWS3 928 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 C4orf19Q8IY42 314 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CFAP206Q8IYR0 622 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 C16orf71Q8IYS4 520 aaPredicted RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 FBXO39Q8N4B4 442 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CAGE1Q8TC20 777 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 TRPC4APQ8TEL6 797 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 TMEM170AQ8WVE7 144 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 LPIN2Q92539 896 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 AKAP1Q92667 903 aaKnown RBP eCLIP4.84□□□□□ -1.63
TSR1-203ENST00000575049 SLC25A28Q96A46 364 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CCDC51Q96ER9 411 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 NECTIN4Q96NY8 510 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 PRR25Q96S07 402 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 ACTRT3Q9BYD9 372 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 NACAP1Q9BZK3 213 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 POLR1EQ9GZS1 481 aaKnown RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 RAB33BQ9H082 229 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 RAB17Q9H0T7 212 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 RPF1Q9H9Y2 349 aaKnown RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 GPN1Q9HCN4 374 aaPredicted RBP4.84□□□□□ -1.63
TSR1-203ENST00000575049 HOMER3Q9NSC5 361 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 FBXO40Q9UH90 709 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 MAD2L2Q9UI95 211 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 DNPEPQ9ULA0 475 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 MTUS1Q9ULD2 1270 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 SNX6Q9UNH7 406 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 KCNK6Q9Y257 313 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 CARD8Q9Y2G2 431 aa4.84□□□□□ -1.63
TSR1-203ENST00000575049 A0A1W2PP64 1363 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 KIAA0232Q92628 1395 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 TTC41PQ6P2S7 1318 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 A0A087WZY1 265 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 TCRBV7S3A2A0A539 114 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 ZSCAN5BA6NJL1 495 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 H0YIN7 160 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 M0QX08 132 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 TLR4O00206 839 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 SMAD9O15198 467 aaKnown RBP4.83□□□□□ -1.64
TSR1-203ENST00000575049 CLDN3O15551 220 aa4.83□□□□□ -1.64
TSR1-203ENST00000575049 TMPRSS11DO60235 418 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms