RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SLCO2B1O94956 709 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 TNFSF15O95150 251 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 SLU7O95391 586 aaKnown RBP13.2□□□□□ -0.3
RPAIN-213ENST00000573577 AHSGP02765 367 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 RPN2P04844 631 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 ITGA2BP08514 1039 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 HOXB3P14651 431 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-213ENST00000573577 PDHA2P29803 388 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 MLLT3P42568 568 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-213ENST00000573577 CFHR1Q03591 330 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 SLMAPQ14BN4 828 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 TTLL9Q3SXZ7 439 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 CNSTQ6PJW8 725 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 SLC22A15Q8IZD6 547 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 FBXO39Q8N4B4 442 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 EIF1ADQ8N9N8 165 aaKnown RBP13.2□□□□□ -0.3
RPAIN-213ENST00000573577 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 LKAAEAR1Q8TD35 194 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 CCDC74BQ96LY2 380 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 CMKLR1Q99788 373 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
RPAIN-213ENST00000573577 TBC1D10AQ9BXI6 508 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 MVB12BQ9H7P6 319 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 LRRC4CQ9HCJ2 640 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 SLC40A1Q9NP59 571 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 LATS2Q9NRM7 1088 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 NFU1Q9UMS0 254 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 LOXL2Q9Y4K0 774 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 CFAP20Q9Y6A4 193 aaKnown RBP13.2□□□□□ -0.3
RPAIN-213ENST00000573577 CACNA1BQ00975 2339 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 ACACAQ13085 2346 aa13.2□□□□□ -0.3
RPAIN-213ENST00000573577 PKD1L2Q7Z442 2459 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 A0A087WV48 116 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 CDRT15L2A8MXV6 281 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 KDM1AO60341 852 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 NIPSNAP2O75323 286 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 KRT37O76014 449 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 JMJD7P0C870 316 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 THRAP10827 490 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 HGFP14210 728 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 ATP5DP30049 168 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 ECHS1P30084 290 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 SKIV2L2P42285 1042 aaKnown RBP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 MAPK9P45984 424 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 LIMK2P53671 638 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 PCBP4P57723 403 aaKnown RBP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 GPX6P59796 221 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 NAB1Q13506 487 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 TRA2AQ13595 282 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 C16orf72Q14CZ0 275 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 PLCL1Q15111 1095 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 TMEM71Q6P5X7 295 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 KLHL35Q6PF15 583 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 WDR74Q6RFH5 385 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 NAPRTQ6XQN6 538 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 STRA8Q7Z7C7 330 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 ZBTB2Q8N680 514 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 TFGQ92734 400 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-213ENST00000573577 FOPNLQ96NB1 174 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 FERD3LQ96RJ6 166 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 CPNE1Q99829 537 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 TAS2R13Q9NYV9 303 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 TMEM9Q9P0T7 183 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 ASF1AQ9Y294 204 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 LAMA5O15230 3695 aa13.19□□□□□ -0.3
RPAIN-213ENST00000573577 PRAMEF33A0A0G2JMD5 474 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 FAM159BA6NKW6 160 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 RRP8O43159 456 aaKnown RBP13.18□□□□□ -0.3
RPAIN-213ENST00000573577 AMD1P17707 334 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 CD9P21926 228 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 MPSTP25325 297 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 ACADLP28330 430 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 GABRB3P28472 473 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 GPR18Q14330 331 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 FAM45BPQ6NSW5 357 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 ZNF549Q6P9A3 640 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 CLEC14AQ86T13 490 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 GPATCH11Q8N954 259 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 ZNF248Q8NDW4 579 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 ACVR1CQ8NER5 493 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 FAM45AQ8TCE6 357 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 SKA2Q8WVK7 121 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-213ENST00000573577 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■■■■■ 32.7
RPAIN-213ENST00000573577 NCSTNQ92542 709 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 INPP5DQ92835 1189 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 FAM136AQ96C01 138 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 TRIT1Q9H3H1 467 aaKnown RBP13.18□□□□□ -0.3
RPAIN-213ENST00000573577 KIR3DX1Q9H7L2 352 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 AKAP7Q9P0M2 348 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-213ENST00000573577 PDP2Q9P2J9 529 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 PISDQ9UG56 409 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 POLG2Q9UHN1 485 aa13.18□□□□□ -0.3
RPAIN-213ENST00000573577 TRMT6Q9UJA5 497 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms