RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 SLBPQ14493 270 aaKnown RBP eCLIP9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 SPARCL1Q14515 664 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 NKG7Q16617 165 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 CACHD1Q5VU97 1274 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 HIST2H2BCQ6DN03 193 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 CEACAM20Q6UY09 585 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 TRIM48Q8IWZ4 208 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 TC2NQ8N9U0 490 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 CCDC112Q8NEF3 446 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 OR13C4Q8NGS5 318 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 GDAP1Q8TB36 358 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 CT55Q8WUE5 264 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 RMDN2Q96LZ7 410 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 CCDC42Q96M95 316 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 MAP3K3Q99759 626 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 TIMM29Q9BSF4 260 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 TRIM55Q9BYV6 548 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 ASPSCR1Q9BZE9 553 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 B3GNT4Q9C0J1 378 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 ZNF768Q9H5H4 540 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 RMI1Q9H9A7 625 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 FBXO8Q9NRD0 319 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 STOML1Q9UBI4 398 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 LNPEPQ9UIQ6 1025 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 PPT2Q9UMR5 302 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 PLAAQ9Y263 795 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 ALG6Q9Y672 507 aa9.02□□□□□ -0.97
NPLOC4-210ENST00000572824 HIVEP3Q5T1R4 2406 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 CCDC78A2IDD5 438 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 HMX2A2RU54 273 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 RGSL1A5PLK6 1076 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 ZNF487B1APH4 448 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 KMOO15229 486 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 POP7O75817 140 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 NDUFA10O95299 355 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 IGHA1P01876 353 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 ANKRD34CP0C6C1 535 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 AMD1P17707 334 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 PSMB4P28070 264 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 DNAJA1P31689 397 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 SPAM1P38567 509 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 CSRP3P50461 194 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 MSLNQ13421 630 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 IL10RAQ13651 578 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 SLC1A5Q15758 541 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 GPR19Q15760 415 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 RPE65Q16518 533 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 FNBP1LQ5T0N5 605 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 LRRC38Q5VT99 294 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 PWWP2BQ6NUJ5 590 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 TMEM220Q6QAJ8 160 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 PAOXQ6QHF9 649 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 ATG14Q6ZNE5 492 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 GLT6D1Q7Z4J2 308 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 MCATQ8IVS2 390 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 MRPL41Q8IXM3 137 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 TAB3Q8N5C8 712 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 SLC38A9Q8NBW4 561 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 C9orf43Q8TAL5 461 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 TFB1MQ8WVM0 346 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 ALG3Q92685 438 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 CXorf40BQ96DE9 158 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 IQCDQ96DY2 449 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 VPS35Q96QK1 796 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 MAK16Q9BXY0 300 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 KLHL25Q9H0H3 589 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 WWP1Q9H0M0 922 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 STN1Q9H668 368 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 C7orf69Q9H7B7 122 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 C1GALT1Q9NS00 363 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 IMP3Q9NV31 184 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 PIH1D1Q9NWS0 290 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 FAM153AQ9UHL3 310 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 REXO2Q9Y3B8 237 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 DUSP10Q9Y6W6 482 aa9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 MDC1Q14676 2089 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-210ENST00000572824 GLYATL1P3A0A0U1RQE8 302 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 MACROD2A1Z1Q3 448 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 MASP2O00187 686 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 MTSS1O43312 755 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 PSTPIP1O43586 416 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 DNAJA2O60884 412 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 KATNA1O75449 491 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 SPAG6O75602 509 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 NTRK1P04629 796 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 H2AFB1P0C5Y9 115 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 H2AFB2P0C5Z0 115 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 RNF224P0DH78 156 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 HMGCLP35914 325 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 ARHGAP25P42331 645 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 CCR10P46092 362 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 UQCRFS1P47985 274 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 KPNA2P52292 529 aaKnown RBP9□□□□□ -0.97
NPLOC4-210ENST00000572824 MLLT10P55197 1068 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 OTUD4Q01804 1114 aaKnown RBP9□□□□□ -0.97
NPLOC4-210ENST00000572824 ABHD18Q0P651 414 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 ABRQ12979 859 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 LAMB3Q13751 1172 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 SLC14A2Q15849 920 aa9□□□□□ -0.97
NPLOC4-210ENST00000572824 PPP2R5EQ16537 467 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms