RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TMPRSS9Q7Z410 1059 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 KCNMB4Q86W47 210 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 OOSP2Q86WS3 158 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 LRRC6Q86X45 466 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 SLITRK4Q8IW52 837 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 KRT222Q8N1A0 295 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 AGBL5Q8NDL9 886 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 PHC3Q8NDX5 983 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 GPR150Q8NGU9 434 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 SNIP1Q8TAD8 396 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 TFGQ92734 400 aaPredicted RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 CFAP36Q96G28 342 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 ZDHHC12Q96GR4 267 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 SIGLEC10Q96LC7 697 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 RMDN2Q96LZ7 410 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 TGM7Q96PF1 710 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 TCF12Q99081 682 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 TRIM56Q9BRZ2 755 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 FAM167BQ9BTA0 163 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 NAT9Q9BTE0 207 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 CARD6Q9BX69 1037 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 RAB17Q9H0T7 212 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 IL1RAPL1Q9NZN1 696 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 TMEM9Q9P0T7 183 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 MARCH4Q9P2E8 410 aaPredicted RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 CDC23Q9UJX2 597 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 CHMP2BQ9UQN3 213 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 ASF1AQ9Y294 204 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 CRYL1Q9Y2S2 319 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 TDRKHQ9Y2W6 561 aaKnown RBP7.59□□□□□ -1.19
SMG6-211ENST00000572369 SNX24Q9Y343 169 aa7.59□□□□□ -1.19
SMG6-211ENST00000572369 CELSR2Q9HCU4 2923 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 TLN1Q9Y490 2541 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 OR6C74A6NCV1 312 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 IQCF5A8MTL0 148 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 H3BMM5 538 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 HGSO14964 777 aaPredicted RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 CAPN5O15484 640 aaPredicted RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 RAD51CO43502 376 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 SEC31AO94979 1220 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 TTC4O95801 387 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 TUBB4AP04350 444 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 THRAP10827 490 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 ITIH1P19827 911 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 RPS3P23396 243 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMG6-211ENST00000572369 ELK3P41970 407 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 MAGEA3P43357 314 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 RPL21P46778 160 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 CAPZBP47756 277 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 CD151P48509 253 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 SEPHS1P49903 392 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 PDX1P52945 283 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 GFERP55789 205 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 PDIA2Q13087 525 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 PRKG2Q13237 762 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 CTBP1Q13363 440 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 SQSTM1Q13501 440 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 CRYMQ14894 314 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 WHAMMP3Q1A5X7 153 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 TBC1D25Q3MII6 688 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 SPANXN3Q5MJ09 141 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 CACHD1Q5VU97 1274 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 CAPRIN2Q6IMN6 1127 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 HIBCHQ6NVY1 386 aaPredicted RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 C8orf74Q6P047 294 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 TTC23LQ6PF05 361 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 FAM92BQ6ZTR7 304 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 CENPUQ71F23 418 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 OTOAQ7RTW8 1153 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 TMEM135Q86UB9 458 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 ANKMY2Q8IV38 441 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 LMNTD2Q8IXW0 634 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 MNS1Q8NEH6 495 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 ACVR1CQ8NER5 493 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 CFAP61Q8NHU2 1237 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 ZFPM2Q8WW38 1151 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 ASZ1Q8WWH4 475 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 LCN9Q8WX39 176 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 RSC1A1Q92681 617 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 FGF11Q92914 225 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 POM121Q96HA1 1249 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 PRR11Q96HE9 360 aaPredicted RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 NAF1Q96HR8 494 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 ZNF578Q96N58 590 aaPredicted RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 SLC46A1Q96NT5 459 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 EBNA1BP2Q99848 306 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 ERP44Q9BS26 406 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 HGH1Q9BTY7 390 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 OR52A5Q9H2C5 316 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 TRIT1Q9H3H1 467 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 SRMSQ9H3Y6 488 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 KIR3DX1Q9H7L2 352 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 MVB12BQ9H7P6 319 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 FBXO6Q9NRD1 293 aaPredicted RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 IARS2Q9NSE4 1012 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 INTS10Q9NVR2 710 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 ZC3H7BQ9UGR2 993 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 SLC24A2Q9UI40 661 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms