RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	KLHL38	Q2WGJ6	581 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TMPRSS7	Q7RTY8	843 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TMPRSS9	Q7Z410	1059 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SPNS2	Q8IVW8	549 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CPNE9	Q8IYJ1	553 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TBC1D21	Q8IYX1	336 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ACVR1C	Q8NER5	493 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OR5K2	Q8NHB8	316 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	UHMK1	Q8TAS1	419 aa	Known RBP	11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	NCSTN	Q92542	709 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	UBXN4	Q92575	508 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MRRF	Q96E11	262 aa	Known RBP	11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	FOPNL	Q96NB1	174 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CYTH2	Q99418	400 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	NUDT22	Q9BRQ3	303 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MCMBP	Q9BTE3	642 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	EPB41L1	Q9H4G0	881 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ACSS3	Q9H6R3	686 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	KLHL42	Q9P2K6	505 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	POLG2	Q9UHN1	485 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	KLK13	Q9UKR3	277 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RUVBL2	Q9Y230	463 aa	Known RBP	11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TDRKH	Q9Y2W6	561 aa	Known RBP	11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	VWA7	Q9Y334	891 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	NFS1	Q9Y697	457 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SCN2A	Q99250	2005 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845	NCOR2	Q9Y618	2525 aa		11.26	□□□□□ -0.61
ATP2A3-208	ENST00000570845		A0A087WUV0	522 aa	Predicted RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CBSL	P0DN79	551 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ENO3	P13929	434 aa	Predicted RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SPINK2	P20155	84 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CD9	P21926	228 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SPR	P35270	261 aa	Predicted RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CBS	P35520	551 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	BDKRB1	P46663	353 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	PGGT1B	P53609	377 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	VSNL1	P62760	191 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CFHR1	Q03591	330 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ILF2	Q12905	390 aa	Known RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SQSTM1	Q13501	440 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	UAP1	Q16222	522 aa	Predicted RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CLPP	Q16740	277 aa	Predicted RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ISX	Q2M1V0	245 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ERCC6L	Q2NKX8	1250 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	GRTP1	Q5TC63	336 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	PAQR3	Q6TCH7	311 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	NEK10	Q6ZWH5	1172 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	B3GNT8	Q7Z7M8	397 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MARCH9	Q86YJ5	346 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	DCUN1D3	Q8IWE4	304 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	DCBLD1	Q8N8Z6	715 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OR52E1	Q8NGJ3	308 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	EEF1AKMT1	Q8WVE0	214 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	LCN9	Q8WX39	176 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RSC1A1	Q92681	617 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OLFM1	Q99784	485 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	DPYSL5	Q9BPU6	564 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SCNM1	Q9BWG6	230 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	FUT8	Q9BYC5	575 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OGFR	Q9NZT2	677 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TMEM9	Q9P0T7	183 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SLC39A10	Q9ULF5	831 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	PLAGL1	Q9UM63	463 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	WASF3	Q9UPY6	502 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MTO1	Q9Y2Z2	717 aa	Known RBP	11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	FRY	Q5TBA9	3013 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CEP295	Q9C0D2	2601 aa		11.25	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OR6C74	A6NCV1	312 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	EIF3F	O00303	357 aa	Predicted RBP	11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RIPK2	O43353	540 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	KDM1A	O60341	852 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MATN4	O95460	622 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	MPC1L	P0DKB6	136 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	HOXB3	P14651	431 aa	Predicted RBP	11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CAPZB	P47756	277 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	RGS4	P49798	205 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	PDX1	P52945	283 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	LIMK2	P53671	638 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SLC12A2	P55011	1212 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	INHBC	P55103	352 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	PHF19	Q5T6S3	580 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	LRRC8E	Q6NSJ5	796 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TTC23L	Q6PF05	361 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	KLHL35	Q6PF15	583 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	WDR74	Q6RFH5	385 aa	Predicted RBP	11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OOSP2	Q86WS3	158 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	SLITRK4	Q8IW52	837 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CACTIN-AS1	Q8N1I8	211 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OR4E2	Q8NGC2	313 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	OR4D9	Q8NGE8	314 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	LINGO1	Q96FE5	620 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	CCDC74B	Q96LY2	380 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	TMEM74	Q96NL1	305 aa		11.24	□□□□□ -0.61
ATP2A3-208	ENST00000570845	GPR22	Q99680	433 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms