RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 PANX1Q96RD7 426 aa15.03■□□□□ -0
USP43-202ENST00000570475 HERC2P3Q9BVR0 1158 aa15.03■□□□□ -0
USP43-202ENST00000570475 NUSAP1Q9BXS6 441 aaKnown RBP15.03■□□□□ -0
USP43-202ENST00000570475 DNAJB9Q9UBS3 223 aa15.03■□□□□ -0
USP43-202ENST00000570475 TNPO3Q9Y5L0 923 aaKnown RBP15.03■□□□□ -0
USP43-202ENST00000570475 SIP14410 1827 aa15.03■□□□□ -0
USP43-202ENST00000570475 M0QZQ0 153 aa15.03■□□□□ -0
USP43-202ENST00000570475 E2F3O00716 465 aa15.03■□□□□ -0
USP43-202ENST00000570475 PER2O15055 1255 aa15.03■□□□□ -0
USP43-202ENST00000570475 FUCA1P04066 466 aa15.03■□□□□ -0
USP43-202ENST00000570475 BMP1P13497 986 aa15.03■□□□□ -0
USP43-202ENST00000570475 SPRED1Q7Z699 444 aa15.03■□□□□ -0
USP43-202ENST00000570475 SERINC5Q86VE9 423 aa15.03■□□□□ -0
USP43-202ENST00000570475 RGL4Q8IZJ4 473 aa15.03■□□□□ -0
USP43-202ENST00000570475 GPR156Q8NFN8 814 aa15.03■□□□□ -0
USP43-202ENST00000570475 REXO5Q96IC2 774 aaKnown RBP15.03■□□□□ -0
USP43-202ENST00000570475 HMG20AQ9NP66 347 aa15.03■□□□□ -0
USP43-202ENST00000570475 SH3BP4Q9P0V3 963 aa15.03■□□□□ -0
USP43-202ENST00000570475 PCDHB7Q9Y5E2 793 aa15.03■□□□□ -0
USP43-202ENST00000570475 TRIM43BA6NCK2 446 aa15.02■□□□□ -0
USP43-202ENST00000570475 TBKBP1A7MCY6 615 aa15.02■□□□□ -0
USP43-202ENST00000570475 PRRG1O14668 218 aa15.02■□□□□ -0
USP43-202ENST00000570475 BCAS1O75363 584 aaPredicted RBP15.02■□□□□ -0
USP43-202ENST00000570475 SEC24AO95486 1093 aa15.02■□□□□ -0
USP43-202ENST00000570475 CSRP3P50461 194 aa15.02■□□□□ -0
USP43-202ENST00000570475 ZXDBP98169 803 aa15.02■□□□□ -0
USP43-202ENST00000570475 MOGQ16653 247 aa15.02■□□□□ -0
USP43-202ENST00000570475 DCDC5Q6ZRR9 648 aa15.02■□□□□ -0
USP43-202ENST00000570475 SPARTQ8N0X7 666 aa15.02■□□□□ -0
USP43-202ENST00000570475 MED8Q96G25 268 aa15.02■□□□□ -0
USP43-202ENST00000570475 EGLN2Q96KS0 407 aa15.02■□□□□ -0
USP43-202ENST00000570475 DPH2Q9BQC3 489 aaPredicted RBP15.02■□□□□ -0
USP43-202ENST00000570475 EXOSC4Q9NPD3 245 aaKnown RBP15.02■□□□□ -0
USP43-202ENST00000570475 PSME4Q14997 1843 aa15.02■□□□□ -0
USP43-202ENST00000570475 CAPN15O75808 1086 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 KRT6AP02538 564 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 KRT6BP04259 564 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 POU2F1P14859 743 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 HOXC13P31276 330 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 KRT6CP48668 564 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 SMAD3P84022 425 aaKnown RBP15.02□□□□□ -0.01
USP43-202ENST00000570475 NFKB2Q00653 900 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 CYP27C1Q4G0S4 372 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 CTSL3PQ5NE16 218 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 OR4F3Q6IEY1 312 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 GPR153Q6NV75 609 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 IGFN1Q86VF2 1251 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 ABHD11Q8NFV4 315 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 NETO1Q8TDF5 533 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 STON2Q8WXE9 905 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 MAGED4Q96JG8 741 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 FAM210AQ96ND0 272 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 RBM4BQ9BQ04 359 aaKnown RBP15.02□□□□□ -0.01
USP43-202ENST00000570475 RBM4Q9BWF3 364 aaKnown RBP15.02□□□□□ -0.01
USP43-202ENST00000570475 RRAGCQ9HB90 399 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 TLR9Q9NR96 1032 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 ARIH1Q9Y4X5 557 aaPredicted RBP15.02□□□□□ -0.01
USP43-202ENST00000570475 PAPPA2Q9BXP8 1791 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 PARP14Q460N5 1801 aa15.02□□□□□ -0.01
USP43-202ENST00000570475 CLDN25C9JDP6 229 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 KPNA4O00629 521 aaPredicted RBP15.01□□□□□ -0.01
USP43-202ENST00000570475 ZSCAN9O15535 394 aaPredicted RBP15.01□□□□□ -0.01
USP43-202ENST00000570475 CREG1O75629 220 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 WDR47O94967 919 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 PFKLP17858 780 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 TYMPP19971 482 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 PBLDP30039 288 aaPredicted RBP15.01□□□□□ -0.01
USP43-202ENST00000570475 PCYT1AP49585 367 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 BCAP31P51572 246 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 FOXM1Q08050 763 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 LRRC74AQ0VAA2 488 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 RAPSNQ13702 412 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 NPTX1Q15818 432 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 HECTD3Q5T447 861 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 ANKS3Q6ZW76 656 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 SZRD1Q7Z422 152 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 C11orf74Q86VG3 221 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 UBE2FQ969M7 185 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 MTERF1Q99551 399 aaKnown RBP15.01□□□□□ -0.01
USP43-202ENST00000570475 INPP5KQ9BT40 448 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 MAGEH1Q9H213 219 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 CARS2Q9HA77 564 aaKnown RBP15.01□□□□□ -0.01
USP43-202ENST00000570475 TRPM5Q9NZQ8 1165 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 MTRRQ9UBK8 725 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 GMEB1Q9Y692 573 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 TULP3O75386 442 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 CYP11A1P05108 521 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 PPP3CCP48454 512 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 NUDT6P53370 316 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 NCS1P62166 190 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 RELAQ04206 551 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 USP41Q3LFD5 358 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 PDCD4Q53EL6 469 aaKnown RBP15.01□□□□□ -0.01
USP43-202ENST00000570475 VTCN1Q7Z7D3 282 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 HEATR4Q86WZ0 1026 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 TMEM132CQ8N3T6 1108 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 ZNF583Q96ND8 569 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 PSKH2Q96QS6 385 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 SH3GL1Q99961 368 aa15.01□□□□□ -0.01
USP43-202ENST00000570475 RHNO1Q9BSD3 238 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms