RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 BEND2Q8NDZ0 799 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 SRFBP1Q8NEF9 429 aaKnown RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 JOSD2Q8TAC2 188 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 GRK7Q8WTQ7 553 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 FAM172AQ8WUF8 416 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 RXFP2Q8WXD0 754 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 KRT35Q92764 455 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 KCNJ9Q92806 393 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 NT5C3BQ969T7 300 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 FAM149B1Q96BN6 582 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 R3HDM4Q96D70 268 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 VMP1Q96GC9 406 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 GNRHR2Q96P88 292 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 PSMB7Q99436 277 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 RAD9AQ99638 391 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 LBHD1Q9BQE6 289 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 FAM129AQ9BZQ8 928 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 OR10A4Q9H209 315 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 GOLPH3Q9H4A6 298 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 CCDC177Q9NQR7 707 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-222ENST00000570139 ABCC13Q9NSE7 274 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 TMEM74BQ9NUR3 256 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 MRGBPQ9NV56 204 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 SLCO3A1Q9UIG8 710 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 CDH22Q9UJ99 828 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 RASAL2Q9UJF2 1139 aa7.1□□□□□ -1.27
CNOT1-222ENST00000570139 FAM92AA1XBS5 289 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 MTMR11A4FU01 709 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CCDC151A5D8V7 595 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 HHLA1C9JL84 531 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 F8VP50 259 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 TULP2O00295 520 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CLDN5O00501 218 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 PER2O15055 1255 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 HNRNPCL1O60812 293 aaKnown RBP7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CSPG5O95196 566 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 TRUB2O95900 331 aaKnown RBP7.09□□□□□ -1.27
CNOT1-222ENST00000570139 C1SP09871 688 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 TMIGD3P0DMS9 266 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-222ENST00000570139 PEPDP12955 493 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CYP4B1P13584 511 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 ZFXP17010 805 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-222ENST00000570139 IGFBP2P18065 325 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 ITGB8P26012 769 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 TNFRSF8P28908 595 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 DPP6P42658 865 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 PPP3CCP48454 512 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 NXPH1P58417 271 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 OGDHQ02218 1023 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 PLD1Q13393 1074 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 TFDP2Q14188 446 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 MED22Q15528 200 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 TAZQ16635 292 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CYP1B1Q16678 543 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CCDC14Q49A88 953 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 GXYLT1Q4G148 440 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 SLC9B1Q4ZJI4 515 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 BNIPLQ7Z465 357 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 KDELC2Q7Z4H8 507 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CEP57Q86XR8 500 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 GALNT13Q8IUC8 556 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 EMC1Q8N766 993 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 CMASQ8NFW8 434 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-222ENST00000570139 XAGE5Q8WWM1 108 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 RAB40AQ8WXH6 277 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 BADQ92934 168 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 SLCO2A1Q92959 643 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 NTAN1Q96AB6 310 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 PKNOX2Q96KN3 472 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 SLITRK1Q96PX8 696 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 NPY6RQ99463 290 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 ZNF670Q9BS34 389 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 ALOXE3Q9BYJ1 711 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 OSBPL8Q9BZF1 889 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 ULBP1Q9BZM6 244 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 TRIM7Q9C029 511 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 RAB17Q9H0T7 212 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 SNX15Q9NRS6 342 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 MRPL17Q9NRX2 175 aaKnown RBP7.09□□□□□ -1.27
CNOT1-222ENST00000570139 KLQ9UEF7 1012 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 PCYOX1Q9UHG3 505 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 SCML2Q9UQR0 700 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 BRCA2P51587 3418 aa7.09□□□□□ -1.27
CNOT1-222ENST00000570139 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CLUHO75153 1309 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 A0A1W2PQM1 296 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 NPIPB13A6NJU9 1138 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 TTC36A6NLP5 189 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 NPIPB5A8MRT5 1133 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 NPIPB4C9JG80 1138 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 F8W810 466 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SCAF4O95104 1147 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 GAS8O95995 478 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 RB1P06400 928 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CHRM4P08173 479 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 PDHA1P08559 390 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 DLDP09622 509 aaKnown RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 HAPLN1P10915 354 aaPredicted RBP7.08□□□□□ -1.28
CNOT1-222ENST00000570139 SLC2A3P11169 496 aa7.08□□□□□ -1.28
CNOT1-222ENST00000570139 CYP2F1P24903 491 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms