RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SGTAO43765 313 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 JRKO75564 520 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 MMP11P24347 488 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
SNX29-207ENST00000568949 GABRA4P48169 554 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 NOMO1Q15155 1222 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 STX1AQ16623 288 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 NKAIN1Q4KMZ8 207 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 FILIP1LQ4L180 1135 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 SIRPB2Q5JXA9 342 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 IRAK1BP1Q5VVH5 260 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 TLDC1Q6P9B6 456 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 SARM1Q6SZW1 724 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 KDELC1Q6UW63 502 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 BNC2Q6ZN30 1099 aaPredicted RBP12.04□□□□□ -0.48
SNX29-207ENST00000568949 GLT6D1Q7Z4J2 308 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 HOOK3Q86VS8 718 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 AMIGO1Q86WK6 493 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 PARP9Q8IXQ6 854 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 ADGRF3Q8IZF5 1079 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 LILRA3Q8N6C8 439 aaPredicted RBP12.04□□□□□ -0.48
SNX29-207ENST00000568949 BCORP1Q8N888 145 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
SNX29-207ENST00000568949 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.04□□□□□ -0.48
SNX29-207ENST00000568949 TEKT5Q96M29 485 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 TRIM56Q9BRZ2 755 aaKnown RBP12.04□□□□□ -0.48
SNX29-207ENST00000568949 SPRTNQ9H040 489 aaPredicted RBP12.04□□□□□ -0.48
SNX29-207ENST00000568949 KLHL25Q9H0H3 589 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 EPS8L2Q9H6S3 715 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 MVB12BQ9H7P6 319 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 FAM60AQ9NP50 221 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 SLC6A20Q9NP91 592 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 TXLNGQ9NUQ3 528 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 OLAHQ9NV23 265 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 UBP1Q9NZI7 540 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 FAM8A1Q9UBU6 413 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 FBXL4Q9UKA2 621 aa12.04□□□□□ -0.48
SNX29-207ENST00000568949 C17orf113A0A1B0GUU1 675 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 IFRD1O00458 451 aaPredicted RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 APOL1O14791 398 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 PCDH17O14917 1159 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 PRAMEF1O95521 474 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 ZFXP17010 805 aaPredicted RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 PTPN3P26045 913 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 CHRNA4P43681 627 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 CD151P48509 253 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 PRLHRP49683 370 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 ZNF630Q2M218 657 aaPredicted RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 ZNF324BQ6AW86 544 aaPredicted RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 SPESP1Q6UW49 350 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 DAAM2Q86T65 1068 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 NXPE1Q8N323 547 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 SLC25A41Q8N5S1 370 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 OR52E1Q8NGJ3 308 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 BLOC1S5Q8TDH9 187 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 SYN2Q92777 582 aaPredicted RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 FKBP10Q96AY3 582 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 RBM41Q96IZ5 413 aaKnown RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 CNDP1Q96KN2 507 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 NDC1Q9BTX1 674 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 MAK16Q9BXY0 300 aaKnown RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 LHPPQ9H008 270 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 OR52A5Q9H2C5 316 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 UVRAGQ9P2Y5 699 aa12.03□□□□□ -0.48
SNX29-207ENST00000568949 DHCR7Q9UBM7 475 aaKnown RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 SUCOQ9UBS9 1254 aaKnown RBP12.03□□□□□ -0.48
SNX29-207ENST00000568949 A0A087X0T9 212 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 LRRD1A4D1F6 860 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 STX7O15400 261 aaKnown RBP12.02□□□□□ -0.49
SNX29-207ENST00000568949 BUD23O43709 281 aaKnown RBP12.02□□□□□ -0.49
SNX29-207ENST00000568949 ONECUT2O95948 504 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 FAM228BP0C875 321 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 RALBP11234 206 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 COX6B1P14854 86 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 HTR1EP28566 365 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 CD68P34810 354 aaPredicted RBP12.02□□□□□ -0.49
SNX29-207ENST00000568949 FOXL2P58012 376 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 SLC9A5Q14940 896 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 SLC1A5Q15758 541 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 MTFR2Q6P444 385 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.49
SNX29-207ENST00000568949 ISLR2Q6UXK2 745 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 ZNF808Q8N4W9 903 aaPredicted RBP12.02□□□□□ -0.49
SNX29-207ENST00000568949 ZNF655Q8N720 491 aaPredicted RBP12.02□□□□□ -0.49
SNX29-207ENST00000568949 HEXDCQ8WVB3 486 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 DCUN1D1Q96GG9 259 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 VPS50Q96JG6 964 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 MRGPRX2Q96LB1 330 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 LMF1Q96S06 567 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 COG4Q9H9E3 785 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 MRM3Q9HC36 420 aaKnown RBP12.02□□□□□ -0.49
SNX29-207ENST00000568949 SLC22A11Q9NSA0 550 aa12.02□□□□□ -0.49
SNX29-207ENST00000568949 ZFHX3Q15911 3703 aa12.01□□□□□ -0.49
SNX29-207ENST00000568949 CCDC78A2IDD5 438 aa12.01□□□□□ -0.49
SNX29-207ENST00000568949 C3orf70A6NLC5 250 aaPredicted RBP12.01□□□□□ -0.49
SNX29-207ENST00000568949 AGAP14A8MT82 685 aa12.01□□□□□ -0.49
SNX29-207ENST00000568949 SOCS6O14544 535 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms