RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 MAPK9P45984 424 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 SIM1P81133 766 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 PIWIL4Q7Z3Z4 852 aaKnown RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 CMC1Q7Z7K0 106 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 MYO1HQ8N1T3 1032 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 NKAPQ8N5F7 415 aaKnown RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 Q8N9G6 341 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 PDLIM5Q96HC4 596 aaKnown RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 KIR3DX1Q9H7L2 352 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 PSMC3IPQ9P2W1 217 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-224ENST00000568877 POLG2Q9UHN1 485 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 PCDHGA1Q9Y5H4 931 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 CFAP54Q96N23 3096 aa16.31■□□□□ 0.2
COMMD4-224ENST00000568877 ARHGEF17Q96PE2 2063 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-224ENST00000568877 LILRA5A6NI73 299 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 ZW10O43264 779 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 B4GAT1O43505 415 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 TCEA3O75764 348 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 KRT37O76014 449 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 C1orf105O95561 183 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 SNRPAP09012 282 aaKnown RBP16.3■□□□□ 0.2
COMMD4-224ENST00000568877 SERPINB8P50452 374 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 OR1D5P58170 312 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 PRKG2Q13237 762 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 CCDC157Q569K6 752 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 TTC23LQ6PF05 361 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 RAPH1Q70E73 1250 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 SPRED1Q7Z699 444 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 SLCO6A1Q86UG4 719 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 CNPY4Q8N129 248 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 OR2W6PQ8NHA6 318 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 ANKRD49Q8WVL7 239 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 HNRNPLLQ8WVV9 542 aaKnown RBP16.3■□□□□ 0.2
COMMD4-224ENST00000568877 ASB11Q8WXH4 323 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 HGH1Q9BTY7 390 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 TBC1D10AQ9BXI6 508 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 SNX15Q9NRS6 342 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 KCNK4Q9NYG8 393 aa16.3■□□□□ 0.2
COMMD4-224ENST00000568877 IQANK1A0A1B0GTG1 560 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 TRIM49D1C9J1S8 452 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 GFYI3L273 518 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 PSIP1O75475 530 aaKnown RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 ALDOAP04075 364 aaKnown RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 SLC35E2BP0CK96 405 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 TYK2P29597 1187 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 CCNFP41002 786 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 CSRP3P50461 194 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 EPHA4P54764 986 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 CCL7P80098 99 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 E2F1Q01094 437 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 IFFO1Q0D2I5 559 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 PUM1Q14671 1186 aaKnown RBP eCLIP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 PLCL1Q15111 1095 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 RASA2Q15283 850 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 BEND6Q5SZJ8 279 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 CCDC91Q7Z6B0 441 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 TDRPQ86YL5 185 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 RASGRP3Q8IV61 690 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 DCUN1D3Q8IWE4 304 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 OR52E1Q8NGJ3 308 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 EPS8L3Q8TE67 593 aaKnown RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 JPH3Q8WXH2 748 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 ISL2Q96A47 359 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 MTBPQ96DY7 904 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 TFB2MQ9H5Q4 396 aaKnown RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 APOBEC2Q9Y235 224 aaKnown RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 PLAAQ9Y263 795 aa16.29■□□□□ 0.2
COMMD4-224ENST00000568877 TDRKHQ9Y2W6 561 aaKnown RBP16.29■□□□□ 0.2
COMMD4-224ENST00000568877 IGHV1OR21-1A0A087WYE8 117 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 DKK1O94907 266 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 CATP04040 527 aaKnown RBP16.28■□□□□ 0.2
COMMD4-224ENST00000568877 C2P06681 752 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 C8GP07360 202 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 FTH1P19P0C7X4 201 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 CCDC166P0CW27 439 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 CDK4P11802 303 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 SLC26A3P40879 764 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 BDKRB1P46663 353 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 GPLD1P80108 840 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 TIFABQ6ZNK6 161 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 UBE2R2Q712K3 238 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-224ENST00000568877 OR10G6Q8NH81 332 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 LCN9Q8WX39 176 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 ANKRD7Q92527 254 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 RAD51AP1Q96B01 352 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 UBXN10Q96LJ8 280 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 ROPN1BQ9BZX4 212 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-224ENST00000568877 ABCG4Q9H172 646 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 LRRN3Q9H3W5 708 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 ROPN1Q9HAT0 212 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-224ENST00000568877 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-224ENST00000568877 CTNNAL1Q9UBT7 734 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 TBK1Q9UHD2 729 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 TLK1Q9UKI8 766 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 ACOT9Q9Y305 439 aa16.28■□□□□ 0.2
COMMD4-224ENST00000568877 A0A087X1B8 175 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 A0A096LPK6 155 aa16.27■□□□□ 0.2
COMMD4-224ENST00000568877 A0A1W2PQM1 296 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms