RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 TRIM39Q9HCM9 518 aa11.9□□□□□ -0.5
TMEM170A-205ENST00000568559 IGSF5Q9NSI5 407 aa11.9□□□□□ -0.5
TMEM170A-205ENST00000568559 ZNF490Q9ULM2 529 aaPredicted RBP11.9□□□□□ -0.5
TMEM170A-205ENST00000568559 HMX2A2RU54 273 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 EGFP01133 1207 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 EIF2DP41214 584 aaKnown RBP11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 P2RY2P41231 377 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 BDKRB1P46663 353 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 TDGQ13569 410 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 OR4D1Q15615 310 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 TYSND1Q2T9J0 566 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 LSM12Q3MHD2 195 aaKnown RBP11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 CD200R1Q8TD46 325 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 C10orf82Q8WW14 230 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 DNAJC28Q9NX36 388 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 PRSS21Q9Y6M0 314 aa11.9□□□□□ -0.51
TMEM170A-205ENST00000568559 LRRC14BA6NHZ5 514 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 C2CD4DB7Z1M9 353 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 UNC5CO95185 931 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 CD160O95971 181 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 C17orf64Q86WR6 236 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 TFGQ92734 400 aaPredicted RBP11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 DTD2Q96FN9 168 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 PPP3R2Q96LZ3 170 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 BTBD10Q9BSF8 475 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 EURLQ9NYK6 297 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 WARS2Q9UGM6 360 aaKnown RBP11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 SARDHQ9UL12 918 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 PSMD11O00231 422 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 PIP5K1BO14986 540 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 UROSP10746 265 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 OPRD1P41143 372 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 CCR3P51677 355 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC9B1Q4ZJI4 515 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 PLEKHS1Q5SXH7 462 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 ZNF549Q6P9A3 640 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC30A9Q6PML9 568 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 RIPOR1Q6ZS17 1223 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 ARMCX6Q7L4S7 300 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 EGFL6Q8IUX8 553 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 KRT78Q8N1N4 520 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 RHEBL1Q8TAI7 183 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 MZB1Q8WU39 189 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 ARL8BQ9NVJ2 186 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC22A14Q9Y267 594 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 NDUFAF1Q9Y375 327 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 LIN7AO14910 233 aaPredicted RBP11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 KMOO15229 486 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 DNAJC8O75937 253 aaPredicted RBP11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 POU2F2P09086 479 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 AMD1P17707 334 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 POLE2P56282 527 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 ZNF678Q5SXM1 525 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 C9orf64Q5T6V5 341 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 FAM9CQ8IZT9 166 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC40A1Q9NP59 571 aa11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 CCDC177Q9NQR7 707 aaPredicted RBP11.89□□□□□ -0.51
TMEM170A-205ENST00000568559 GSAPA4D1B5 854 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 MRASO14807 208 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 GGT5P36269 586 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 PXNP49023 591 aaPredicted RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 AP1S2P56377 157 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 C21orf59P57076 290 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 PTERQ96BW5 349 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 MIEF2Q96C03 454 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 NSUN5Q96P11 429 aaKnown RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 ING2Q9H160 280 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC6A17Q9H1V8 727 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 FBRSQ9HAH7 460 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SGK2Q9HBY8 427 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 AHSPQ9NZD4 102 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 KANSL1LA0AUZ9 987 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 FAM170BA6NMN3 283 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 G3V2L1 256 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC28A1O00337 649 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 GREM1O60565 184 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 VIPP01282 170 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SF1Q15637 639 aaKnown RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 PTCHD3Q3KNS1 767 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 MBOAT1Q6ZNC8 495 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 YTHDF3Q7Z739 585 aaKnown RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SCUBE1Q8IWY4 988 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 PHC3Q8NDX5 983 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 SLC25A23Q9BV35 468 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 TRIM15Q9C019 465 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 COPS7BQ9H9Q2 264 aaPredicted RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 EMCNQ9ULC0 261 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 COLQQ9Y215 455 aaPredicted RBP11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 MTCH2Q9Y6C9 303 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 A0A0G2JN53 185 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 TMEM247A6NEH6 219 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 CCDC154A6NI56 674 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 FZD6O60353 706 aa11.88□□□□□ -0.51
TMEM170A-205ENST00000568559 DHRS4L1P0CG22 281 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms