RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 KRT8P05787 483 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CCL5P13501 91 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CPB1P15086 417 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 LBPP18428 481 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CES1P23141 567 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ADRA1AP35348 466 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 MTHFRP42898 656 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KCNC1P48547 511 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 AIF1P55008 147 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ZNF33AQ06730 810 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SCAPQ12770 1279 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KEAP1Q14145 624 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 Q5BKY6 102 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 RSBN1Q5VWQ0 802 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 FAM219BQ5XKK7 198 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 GLYATQ6IB77 296 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 NAPEPLDQ6IQ20 393 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CCDC81Q6ZN84 652 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 C14orf80Q86SX3 495 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 RALGPS2Q86X27 583 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ZDHHC13Q8IUH4 622 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 HID1Q8IV36 788 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 DTWD1Q8N5C7 304 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ESX1Q8N693 406 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CELF2-AS1Q8N7Q2 184 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 MCFD2Q8NI22 146 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 PROX1Q92786 737 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TRIM63Q969Q1 353 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 RHBDF1Q96CC6 855 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 HPDLQ96IR7 371 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TEKT5Q96M29 485 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 RIPOR3Q96MK2 946 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KAT8Q9H7Z6 458 aaKnown RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SMURF2Q9HAU4 748 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ARNT2Q9HBZ2 717 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CNGB3Q9NQW8 809 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 FAM49BQ9NUQ9 324 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KLHL8Q9P2G9 620 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 POLG2Q9UHN1 485 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 REV3LO60673 3130 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ANKRD36A6QL64 1941 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ATP6AP2A0A1C7CYW4 349 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KCNK1O00180 336 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ARNTLO00327 626 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CDK2AP1O14519 115 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 PIP5K1BO14986 540 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TBX1O43435 398 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 HUS1O60921 280 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ATP6AP2O75787 350 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 DLGAP3O95886 979 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 C1RP00736 705 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 MYCP01106 439 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 EFNA1P20827 205 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 AKAP5P24588 427 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CD52P31358 61 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 DSC1Q08554 894 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TARDBPQ13148 414 aaKnown RBP eCLIP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CTBP1Q13363 440 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 IKZF1Q13422 519 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 NFYCQ13952 458 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 NKG7Q16617 165 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KIF19Q2TAC6 998 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 RFX4Q33E94 735 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 PLA2G4EQ3MJ16 856 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 PARP15Q460N3 678 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 XKR7Q5GH72 579 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KIAA0930Q6ICG6 404 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TXNDC11Q6PKC3 985 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TMC5Q6UXY8 1006 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 IDO2Q6ZQW0 420 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 NECAB2Q7Z6G3 386 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ISCA2Q86U28 154 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SLC51BQ86UW2 128 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 STK32CQ86UX6 486 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CLEC4FQ8N1N0 589 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 LSMEM1Q8N8F7 131 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 GALNT6Q8NCL4 622 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 PSD4Q8NDX1 1056 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 C3orf58Q8NDZ4 430 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SETD6Q8TBK2 473 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 MCOLN3Q8TDD5 553 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TWIST2Q8WVJ9 160 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SLC39A13Q96H72 371 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 TEX37Q96LM6 180 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 NSMCE2Q96MF7 247 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 NPY6RQ99463 290 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SEPHS2Q99611 448 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CDADC1Q9BWV3 514 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 EPS8L2Q9H6S3 715 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 ZFP14Q9HCL3 533 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SEPT10Q9P0V9 454 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 RABL2AQ9UBK7 228 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 KCNN3Q9UGI6 736 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 LEF1Q9UJU2 399 aaPredicted RBP5.35□□□□□ -1.55
LINC01541-202ENST00000568095 SATB2Q9UPW6 733 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 PRELID1Q9Y255 219 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 FIS1Q9Y3D6 152 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CHD9Q3L8U1 2897 aa5.35□□□□□ -1.55
LINC01541-202ENST00000568095 CHD7Q9P2D1 2997 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms