RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 MPC1LP0DKB6 136 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 CDK9P50750 372 aaKnown RBP22.8■■□□□ 1.24
LINC00543-201ENST00000567234 ADGRE1Q14246 886 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 PDGFRLQ15198 375 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 PHKG1Q16816 387 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 ZNF423Q2M1K9 1284 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 KIF19Q2TAC6 998 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 GAB4Q2WGN9 574 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 REP15Q6BDI9 236 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 ERAP2Q6P179 960 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 TSPEARQ8WU66 669 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 CCDC124Q96CT7 223 aaKnown RBP22.8■■□□□ 1.24
LINC00543-201ENST00000567234 VPS50Q96JG6 964 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 LRGUKQ96M69 825 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 FAM83CQ9BQN1 747 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 CD244Q9BZW8 370 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 TMEM45AQ9NWC5 275 aa22.8■■□□□ 1.24
LINC00543-201ENST00000567234 THG1LQ9NWX6 298 aaKnown RBP22.8■■□□□ 1.24
LINC00543-201ENST00000567234 KIAA1549LQ6ZVL6 1849 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 QSOX1O00391 747 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 FBP2O00757 339 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 PGM3O95394 542 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 ZNF23P17027 643 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 MMP12P39900 470 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 NUP107P57740 925 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 CDKL1Q00532 357 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 HYAL1Q12794 435 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 Q6ZVL8 140 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 TECPR1Q7Z6L1 1165 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 FUNDC1Q8IVP5 155 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 NRSN1Q8IZ57 195 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 DDHD1Q8NEL9 900 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 OR52B6Q8NGF0 335 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 EGFL8Q99944 293 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 CD84Q9UIB8 345 aa22.79■■□□□ 1.24
LINC00543-201ENST00000567234 TSR3Q9UJK0 312 aaKnown RBP22.79■■□□□ 1.24
LINC00543-201ENST00000567234 MUC22E2RYF6 1773 aaPredicted RBP22.79■■□□□ 1.24
LINC00543-201ENST00000567234 SH3PXD2BA1X283 911 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 HEPACAM2A8MVW5 462 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 OR7A17O14581 309 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 C8GP07360 202 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 CDH2P19022 906 aaPredicted RBP22.78■■□□□ 1.24
LINC00543-201ENST00000567234 AKT1P31749 480 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 TCHHL1Q5QJ38 904 aaPredicted RBP22.78■■□□□ 1.24
LINC00543-201ENST00000567234 FAM219BQ5XKK7 198 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 LETMD1Q6P1Q0 360 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 PAOXQ6QHF9 649 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 RNF165Q6ZSG1 346 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 NEK10Q6ZWH5 1172 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 METTL25Q8N6Q8 603 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 TMIEQ8NEW7 156 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 ROPN1LQ96C74 230 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 VPS35Q96QK1 796 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 MTG2Q9H4K7 406 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 IPPKQ9H8X2 491 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 WWOXQ9NZC7 414 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 RSL24D1Q9UHA3 163 aaKnown RBP22.78■■□□□ 1.24
LINC00543-201ENST00000567234 PRRT4C9JH25 899 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 H0Y858 1186 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 SORBS2O94875 1100 aaKnown RBP22.78■■□□□ 1.24
LINC00543-201ENST00000567234 GUCA1CO95843 209 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 HNRNPCP07910 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
LINC00543-201ENST00000567234 ME2P23368 584 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 PIK3CGP48736 1102 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 HSPA7P48741 367 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 THOP1P52888 689 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 PSME3P61289 254 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 TRAF3Q13114 568 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 ZNF284Q2VY69 593 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 Q6ZNX1 250 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 CDYL2Q8N8U2 506 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 SMYD1Q8NB12 490 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 PCYOX1LQ8NBM8 494 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 SCAMP4Q969E2 229 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 OPTCQ9UBM4 332 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 NDUFAF1Q9Y375 327 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 PCDHGA7Q9Y5G6 932 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 GPR45Q9Y5Y3 372 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 AP4B1Q9Y6B7 739 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 CEPT1Q9Y6K0 416 aa22.78■■□□□ 1.24
LINC00543-201ENST00000567234 EDDM13A0A1B0GTR0 161 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 K7EPI3 171 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 SLC16A5O15375 505 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 CFLARO15519 480 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 ANXA5P08758 320 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 ETV3P41162 512 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 ERVK-8P63133 956 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 SP140Q13342 867 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 RPS6KA2Q15349 733 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 C18orf21Q32NC0 220 aaPredicted RBP22.77■■□□□ 1.24
LINC00543-201ENST00000567234 HNRNPA1L2Q32P51 320 aaKnown RBP22.77■■□□□ 1.24
LINC00543-201ENST00000567234 COQ5Q5HYK3 327 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 LDLRAP1Q5SW96 308 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 LIPIQ6XZB0 460 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 PARS2Q7L3T8 475 aaKnown RBP22.77■■□□□ 1.24
LINC00543-201ENST00000567234 GPR149Q86SP6 731 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 TCAIMQ8N3R3 496 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 METTL6Q8TCB7 284 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 NXPE3Q969Y0 559 aa22.77■■□□□ 1.24
LINC00543-201ENST00000567234 ATP6V1E2Q96A05 226 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms