RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 RMDN2Q96LZ7 410 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 MRPL57Q9BQC6 102 aaKnown RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 EDEM2Q9BV94 578 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SLC12A9Q9BXP2 914 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 UNKQ9C0B0 810 aaKnown RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 IL21RQ9HBE5 538 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 PARVBQ9HBI1 364 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SSU72Q9NP77 194 aaKnown RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 TMEM9BQ9NQ34 198 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 IGSF5Q9NSI5 407 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 POT1Q9NUX5 634 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 UCKL1Q9NWZ5 548 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 NKIRAS1Q9NYS0 192 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 NLGN3Q9NZ94 848 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 NCKIPSDQ9NZQ3 722 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 CPNE7Q9UBL6 633 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 POLG2Q9UHN1 485 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 LNPEPQ9UIQ6 1025 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 MID2Q9UJV3 735 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 WDR37Q9Y2I8 494 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 ST14Q9Y5Y6 855 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 CFAP20Q9Y6A4 193 aaKnown RBP7.6□□□□□ -1.19
CDH1-208ENST00000565810 GON4LQ3T8J9 2241 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 VPS13AQ96RL7 3174 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 PLXNA2O75051 1894 aa7.6□□□□□ -1.19
CDH1-208ENST00000565810 SDK1Q7Z5N4 2213 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 MYLKQ15746 1914 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 PLXND1Q9Y4D7 1925 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 A6NCN8 305 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 NPEPPSL1A6NEC2 478 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 ZNF839A8K0R7 811 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 FOXO6A8MYZ6 492 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 CDC7O00311 574 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 PRPF4O43172 522 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDH1-208ENST00000565810 KERAO60938 352 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SMIM24O75264 130 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 PSIP1O75475 530 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 ZWINTO95229 277 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 C1orf105O95561 183 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SYF2O95926 243 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 ANXA5P08758 320 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 TPBGLP0DKB5 382 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 HSD17B2P37059 387 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SLC19A1P41440 591 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 GRK6P43250 576 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 PPM1FP49593 454 aaPredicted RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 AP1S2P56377 157 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 HHEXQ03014 270 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 DLG1Q12959 904 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SLC14A1Q13336 389 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SF3A2Q15428 464 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 TSNQ15631 228 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 C14orf28Q4W4Y0 310 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 N4BP2L1Q5TBK1 243 aaPredicted RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 ZCCHC8Q6NZY4 707 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 OGFOD3Q6PK18 319 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 XKR5Q6UX68 686 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 PRR23CQ6ZRP0 262 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 ISCA2Q86U28 154 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 GATAD2AQ86YP4 633 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 CENPLQ8N0S6 344 aaPredicted RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 NAGSQ8N159 534 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SFRP1Q8N474 314 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 ARL14Q8N4G2 192 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 ARL10Q8N8L6 244 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 BANPQ8N9N5 519 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 FBXO15Q8NCQ5 510 aaPredicted RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 PHC3Q8NDX5 983 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 OR2I1PQ8NGU4 316 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 OR4C6Q8NH72 309 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 OR5K2Q8NHB8 316 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SLC37A2Q8TED4 501 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SREK1Q8WXA9 508 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 CCDC138Q96M89 665 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SLC38A3Q99624 504 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 EGFL8Q99944 293 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SELENOSQ9BQE4 189 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 MRPL46Q9H2W6 279 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 ALG9Q9H6U8 611 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 RDH14Q9HBH5 336 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 DNAAF2Q9NVR5 837 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 ZNF358Q9NW07 568 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 MKS1Q9NXB0 559 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 TMEM216Q9P0N5 145 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 SCHIP1Q9P0W5 487 aaPredicted RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 SIRPGQ9P1W8 387 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 XPR1Q9UBH6 696 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 TMCO1Q9UM00 188 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 TDRKHQ9Y2W6 561 aaKnown RBP7.59□□□□□ -1.19
CDH1-208ENST00000565810 PLLPQ9Y342 182 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 OARD1Q9Y530 152 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 KMT2EQ8IZD2 1858 aa7.59□□□□□ -1.19
CDH1-208ENST00000565810 THADAQ6YHU6 1953 aa7.59□□□□□ -1.2
CDH1-208ENST00000565810 ZNF318Q5VUA4 2279 aa7.58□□□□□ -1.2
CDH1-208ENST00000565810 RHPN2P1A8MT19 583 aa7.58□□□□□ -1.2
CDH1-208ENST00000565810 ARHGEF33A8MVX0 844 aa7.58□□□□□ -1.2
CDH1-208ENST00000565810 SUPT3HB4E1H0 165 aa7.58□□□□□ -1.2
CDH1-208ENST00000565810 TM9SF1O15321 606 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms