RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 LETMD1Q6P1Q0 360 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 MILR1Q7Z6M3 343 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 LILRA3Q8N6C8 439 aaPredicted RBP19.11■□□□□ 0.65
CLN6-205ENST00000564846 CDYL2Q8N8U2 506 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 C1orf21Q9H246 121 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 WDR26Q9H7D7 661 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 MMP17Q9ULZ9 603 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 G3BP2Q9UN86 482 aaKnown RBP19.11■□□□□ 0.65
CLN6-205ENST00000564846 TMEM98Q9Y2Y6 226 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 ST14Q9Y5Y6 855 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3DA0A087WVF3 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3IA0A087WXS9 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3EA0A087X179 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3KA0A087X1G2 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 ATP6AP2A0A1C7CYW4 349 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3FA6NER0 549 aaPredicted RBP19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3LB9A6J9 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 MAN2B1O00754 1011 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 ATP6AP2O75787 350 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3HP0C7X1 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 THRAP10827 490 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 PIK3R1P27986 724 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 SLC6A12P48065 614 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TRAF3Q13114 568 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 LEXMQ3ZCV2 418 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3GQ6DHY5 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3CQ6IPX1 549 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 CRTC3Q6UUV7 619 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 TBC1D3Q8IZP1 549 aaPredicted RBP19.11■□□□□ 0.65
CLN6-205ENST00000564846 OR4F6Q8NGB9 312 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 METTL6Q8TCB7 284 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 ATL1Q8WXF7 558 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 CDK15Q96Q40 435 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 CDX2Q99626 313 aaPredicted RBP19.11■□□□□ 0.65
CLN6-205ENST00000564846 NTMT1Q9BV86 223 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 DPEP2Q9H4A9 486 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 AKTIPQ9H8T0 292 aa19.11■□□□□ 0.65
CLN6-205ENST00000564846 DNMT3AQ9Y6K1 912 aaPredicted RBP19.11■□□□□ 0.65
CLN6-205ENST00000564846 PRR23AA6NEV1 266 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 ARHGEF33A8MVX0 844 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 RASSF9O75901 435 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 LINC00032P0C843 101 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 EBLN1P0CF75 366 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 COX4I1P13073 169 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 PDHA2P29803 388 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 SQLEQ14534 574 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 C11orf96Q7Z7L8 435 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 LRRTM4Q86VH4 590 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 CFAP61Q8NHU2 1237 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 RP9Q8TA86 221 aaKnown RBP19.1■□□□□ 0.65
CLN6-205ENST00000564846 ASB12Q8WXK4 309 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 FBXL8Q96CD0 374 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 CCDC138Q96M89 665 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 MIPEPQ99797 713 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 LGR4Q9BXB1 951 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 OSBPL6Q9BZF3 934 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 PHPT1Q9NRX4 125 aaPredicted RBP19.1■□□□□ 0.65
CLN6-205ENST00000564846 BTRCQ9Y297 605 aa19.1■□□□□ 0.65
CLN6-205ENST00000564846 GSC2O15499 205 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 CAPN1P07384 714 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 HGFP14210 728 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 EZRP15311 586 aaKnown RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 ATP4BP51164 291 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 IRX1P78414 480 aaPredicted RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 HERC3Q15034 1050 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 DNAL1Q4LDG9 190 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 XKR7Q5GH72 579 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 DOK6Q6PKX4 331 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 TMEM92Q6UXU6 159 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 AMZ2Q86W34 360 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 LONP2Q86WA8 852 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 POU5F2Q8N7G0 328 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 FBXO15Q8NCQ5 510 aaPredicted RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 RBM15BQ8NDT2 890 aaKnown RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 UTP4Q969X6 686 aaKnown RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 TUBGCP3Q96CW5 907 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 MARK4Q96L34 752 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 POLG2Q9UHN1 485 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 PTGDR2Q9Y5Y4 395 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 TRPM6Q9BX84 2022 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 LOC100653049A0A140TA62 436 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 KLHL33A6NCF5 533 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 KRT34O76011 436 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 LBPP18428 481 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 NDUFV2P19404 249 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 ELF3P78545 371 aaPredicted RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 RPA4Q13156 261 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 PTCHD3Q3KNS1 767 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 FAM219BQ5XKK7 198 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 PTCRAQ6ISU1 281 aaPredicted RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 KIAA1324Q6UXG2 1013 aaKnown RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 DCBLD1Q8N8Z6 715 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 KLK6Q92876 244 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 CADM1Q9BY67 442 aaKnown RBP19.09■□□□□ 0.65
CLN6-205ENST00000564846 RIC8BQ9NVN3 520 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 TRPS1Q9UHF7 1281 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 OR1A2Q9Y585 309 aa19.09■□□□□ 0.65
CLN6-205ENST00000564846 ANKRD12Q6UB98 2062 aa19.08■□□□□ 0.65
CLN6-205ENST00000564846 ATG2BQ96BY7 2078 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms