RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ATOH8Q96SQ7 321 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 PAFAH2Q99487 392 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 MAK16Q9BXY0 300 aaKnown RBP4.23□□□□□ -1.73
UBR1-205ENST00000564540 SPATC1LQ9H0A9 340 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 ZHX3Q9H4I2 956 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 WSB2Q9NYS7 404 aaPredicted RBP4.23□□□□□ -1.73
UBR1-205ENST00000564540 FLRT3Q9NZU0 649 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 ZHX1Q9UKY1 873 aaPredicted RBP4.23□□□□□ -1.73
UBR1-205ENST00000564540 PRSS21Q9Y6M0 314 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 HYKKA2RU49 373 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 OR2A25A4D2G3 310 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 GAPDHSO14556 408 aaPredicted RBP4.22□□□□□ -1.73
UBR1-205ENST00000564540 DPEP1P16444 411 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 CEBPBP17676 345 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 CA4P22748 312 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 SLC6A12P48065 614 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 PNLIPRP2P54317 469 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 DUSP28Q4G0W2 176 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 STXBP4Q6ZWJ1 553 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 SZRD1Q7Z422 152 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 PIGZQ86VD9 579 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 OR5M8Q8NGP6 311 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 FGFBP3Q8TAT2 258 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 FAM120BQ96EK7 910 aaKnown RBP4.22□□□□□ -1.73
UBR1-205ENST00000564540 FNDC11Q9BVV2 318 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 CDK19Q9BWU1 502 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 S1PR5Q9H228 398 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 SYNCQ9H7C4 482 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 TAB2Q9NYJ8 693 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 MTUS1Q9ULD2 1270 aa4.22□□□□□ -1.73
UBR1-205ENST00000564540 EXOGQ9Y2C4 368 aaKnown RBP4.22□□□□□ -1.73
UBR1-205ENST00000564540 ITIH6Q6UXX5 1313 aa4.21□□□□□ -1.73
UBR1-205ENST00000564540 PRKRAO75569 313 aaKnown RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 GJB3O75712 270 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 SORBS2O94875 1100 aaKnown RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 VPREB1P12018 145 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 GCH1P30793 250 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 ACSL1P33121 698 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 TPD52P55327 224 aaPredicted RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 SIRPAP78324 504 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 CREB5Q02930 508 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 HNRNPDQ14103 355 aaKnown RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 TEX38Q6PEX7 206 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 KBTBD6Q86V97 674 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 CEP57L1Q8IYX8 460 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 C17orf53Q8N3J3 647 aaPredicted RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 FBXO39Q8N4B4 442 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 TRIML1Q8N9V2 468 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 CCDC34Q96HJ3 373 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 CDRT15Q96T59 188 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 BARD1Q99728 777 aaKnown RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 SDR39U1Q9NRG7 319 aaPredicted RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 PAK5Q9P286 719 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 TUBE1Q9UJT0 475 aa4.21□□□□□ -1.74
UBR1-205ENST00000564540 PTRH2Q9Y3E5 179 aaKnown RBP4.21□□□□□ -1.74
UBR1-205ENST00000564540 A0A0J9YWU9 116 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 A0A1W2PN81 502 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 A6NCN8 305 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 SLCO1B7G3V0H7 640 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 H7C423 109 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 GPIP06744 558 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 HOXD13P35453 343 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 CHRNA7P36544 502 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 MAGEA11P43364 429 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 ARSEP51690 589 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 CDK3Q00526 305 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 PRKCZQ05513 592 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 PHLDA2Q53GA4 152 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 KLHL26Q53HC5 615 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 XKR6Q5GH73 641 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 GTSCR1Q86UQ5 136 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 ZNF614Q8N883 585 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 MOCOSQ96EN8 888 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 C18orf12Q96KH6 178 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 VGLL1Q99990 258 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 SYT11Q9BT88 431 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 LMF2Q9BU23 707 aaKnown RBP4.2□□□□□ -1.74
UBR1-205ENST00000564540 TRIM15Q9C019 465 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 GHITMQ9H3K2 345 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 TBC1D17Q9HA65 648 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 BLOC1S4Q9NUP1 217 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 HAUS2Q9NVX0 235 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 ASIC3Q9UHC3 531 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 ZDHHC2Q9UIJ5 367 aa4.2□□□□□ -1.74
UBR1-205ENST00000564540 LAS1LQ9Y4W2 734 aaKnown RBP4.2□□□□□ -1.74
UBR1-205ENST00000564540 FSD2A1L4K1 749 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 ADAMDEC1O15204 470 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 OR10H2O60403 315 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 MOCS3O95396 460 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 TRIM21P19474 475 aaKnown RBP4.19□□□□□ -1.74
UBR1-205ENST00000564540 TYMPP19971 482 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 NRIP1P48552 1158 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 PDX1P52945 283 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 GEMIN4P57678 1058 aaKnown RBP4.19□□□□□ -1.74
UBR1-205ENST00000564540 SNX16P57768 344 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 TAF13Q15543 124 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 TEAD2Q15562 447 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 IGSF11Q5DX21 431 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 PLEKHS1Q5SXH7 462 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms