RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 LINGO1Q96FE5 620 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 CRELD1Q96HD1 420 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 FAR2Q96K12 515 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 ZNF514Q96K75 400 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-203ENST00000564106 ATOH8Q96SQ7 321 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 GATA5Q9BWX5 397 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-203ENST00000564106 ERVK-6Q9BXR3 956 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 SARS2Q9NP81 518 aaKnown RBP9.56□□□□□ -0.88
UBFD1-203ENST00000564106 MRGBPQ9NV56 204 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 HAO1Q9UJM8 370 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 FZD4Q9ULV1 537 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 APOBEC2Q9Y235 224 aaKnown RBP9.56□□□□□ -0.88
UBFD1-203ENST00000564106 STK38LQ9Y2H1 464 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 PCDHGB2Q9Y5G2 931 aa9.56□□□□□ -0.88
UBFD1-203ENST00000564106 TRPM6Q9BX84 2022 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CCT8L1PA6NM43 557 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SUPT3HB4E1H0 165 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 STX16-NPEPL1H3BU86 382 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 STX16O14662 325 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 RAD51BO15315 384 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 FLRT2O43155 660 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 GPR39O43194 453 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 PCDHGA12O60330 932 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SNX2O60749 519 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 HNRNPCL1O60812 293 aaKnown RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SDC3O75056 442 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SUPT3HO75486 399 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SLC25A14O95258 325 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 TRIM16O95361 564 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 ENO2P09104 434 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 C6P13671 934 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 GFAPP14136 432 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 ALOX15P16050 662 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CD38P28907 300 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 EPHA8P29322 1005 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 GMPRP36959 345 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 RPL14P50914 215 aaKnown RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CCT8P50990 548 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CCR5P51681 352 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CLDN2P57739 230 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SEMG2Q02383 582 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 OVGP1Q12889 678 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SP140Q13342 867 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 AGERQ15109 404 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 TBCCQ15814 346 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CDKL4Q5MAI5 379 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 PLEKHS1Q5SXH7 462 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SEL1L3Q68CR1 1132 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 KIAA1161Q6NSJ0 714 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 METTL2BQ6P1Q9 378 aaKnown RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 C19orf48Q6RUI8 117 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 DHRS13Q6UX07 377 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 TMPRSS7Q7RTY8 843 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 PROSER1Q86XN7 944 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 GPSM1Q86YR5 675 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CPNE9Q8IYJ1 553 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SLC22A18ASQ8N1D0 253 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 FBXO39Q8N4B4 442 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SPATA6LQ8N4H0 392 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CLDN19Q8N6F1 224 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 EEF1AKMT1Q8WVE0 214 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 SCAMP4Q969E2 229 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 ELF4Q99607 663 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 WRAP53Q9BUR4 548 aaKnown RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 RIOK2Q9BVS4 552 aaKnown RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 BOCQ9BWV1 1114 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 C1QTNF7Q9BXJ2 289 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 TMEM120AQ9BXJ8 343 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 ABCG8Q9H221 673 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 ACTR5Q9H9F9 607 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 AASDHPPTQ9NRN7 309 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 UCKL1Q9NWZ5 548 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 DNAJC28Q9NX36 388 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 NUDT4Q9NZJ9 180 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 CD84Q9UIB8 345 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 ITM2BQ9Y287 266 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 NCKAP1Q9Y2A7 1128 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 DNAJC16Q9Y2G8 782 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 TNPO3Q9Y5L0 923 aaKnown RBP9.55□□□□□ -0.88
UBFD1-203ENST00000564106 FADS3Q9Y5Q0 445 aa9.55□□□□□ -0.88
UBFD1-203ENST00000564106 TBC1D3DA0A087WVF3 549 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TBC1D3IA0A087WXS9 549 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TBC1D3EA0A087X179 549 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TBC1D3KA0A087X1G2 549 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 KLHL33A6NCF5 533 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TBC1D3FA6NER0 549 aaPredicted RBP9.54□□□□□ -0.88
UBFD1-203ENST00000564106 LRRC72A6NJI9 287 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TBC1D3LB9A6J9 549 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 VEGFDO43915 354 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 CCDC22O60826 627 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 RNGTTO60942 597 aaKnown RBP9.54□□□□□ -0.88
UBFD1-203ENST00000564106 ATP5HO75947 161 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TM7SF2O76062 418 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 RECQL5O94762 991 aaPredicted RBP9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TSPAN12O95859 305 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TBC1D3HP0C7X1 549 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 GIMD1P0DJR0 217 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 MPC1LP0DKB6 136 aa9.54□□□□□ -0.88
UBFD1-203ENST00000564106 TEAD1P28347 426 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms