RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 C10orf88Q9H8K7 445 aa20.25■□□□□ 0.83
HERC2-204ENST00000563945 ZDHHC3Q9NYG2 299 aa20.25■□□□□ 0.83
HERC2-204ENST00000563945 ACTR10Q9NZ32 417 aa20.25■□□□□ 0.83
HERC2-204ENST00000563945 AP1M2Q9Y6Q5 423 aa20.25■□□□□ 0.83
HERC2-204ENST00000563945 PRRC2CQ9Y520 2896 aaKnown RBP20.24■□□□□ 0.83
HERC2-204ENST00000563945 AGAP14A8MT82 685 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 SGTAO43765 313 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 CAPN1P07384 714 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 HADHBP55084 474 aaKnown RBP20.24■□□□□ 0.83
HERC2-204ENST00000563945 RPA4Q13156 261 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 ELOAQ14241 798 aaKnown RBP20.24■□□□□ 0.83
HERC2-204ENST00000563945 SSPNQ14714 243 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 ANKRD20A2Q5SQ80 823 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 ANKRD20A1Q5TYW2 823 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 ANKRD20A3Q5VUR7 823 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 LYPLAL1Q5VWZ2 237 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 DARS2Q6PI48 645 aaKnown RBP20.24■□□□□ 0.83
HERC2-204ENST00000563945 SMAD5Q99717 465 aaKnown RBP20.24■□□□□ 0.83
HERC2-204ENST00000563945 HGH1Q9BTY7 390 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 PITPNM3Q9BZ71 974 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 GOLPH3Q9H4A6 298 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 XKR8Q9H6D3 395 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 IRAK4Q9NWZ3 460 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 NDOR1Q9UHB4 597 aa20.24■□□□□ 0.83
HERC2-204ENST00000563945 FEZ2Q9UHY8 353 aaPredicted RBP20.24■□□□□ 0.83
HERC2-204ENST00000563945 AKR1B15C9JRZ8 316 aaPredicted RBP20.23■□□□□ 0.83
HERC2-204ENST00000563945 PVRP15151 417 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 PSMB4P28070 264 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 MC4RP32245 332 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 ADRA1AP35348 466 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 CETN2P41208 172 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 FOLR3P41439 243 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 COPS2P61201 443 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 ZNF789Q5FWF6 425 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 Q8NA96 180 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 TM9SF4Q92544 642 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 TCTN2Q96GX1 697 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 ALS2CR12Q96Q35 445 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 C19orf43Q9BQ61 176 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 TBL1YQ9BQ87 522 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 OR52A5Q9H2C5 316 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 LUC7LQ9NQ29 371 aaKnown RBP20.23■□□□□ 0.83
HERC2-204ENST00000563945 TXLNGQ9NUQ3 528 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 IFT80Q9P2H3 777 aaPredicted RBP20.23■□□□□ 0.83
HERC2-204ENST00000563945 SHANK1Q9Y566 2161 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 UNC79Q9P2D8 2635 aa20.23■□□□□ 0.83
HERC2-204ENST00000563945 KCNN4O15554 427 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 OR2B3O76000 313 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 GSTM1P09488 218 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 PDHA2P29803 388 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 EIF3EP60228 445 aaKnown RBP20.22■□□□□ 0.83
HERC2-204ENST00000563945 OTUD4Q01804 1114 aaKnown RBP20.22■□□□□ 0.83
HERC2-204ENST00000563945 GSTM4Q03013 218 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 OLIG2Q13516 323 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 SPESP1Q6UW49 350 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 CDHR3Q6ZTQ4 885 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 ACTL9Q8TC94 416 aa20.22■□□□□ 0.83
HERC2-204ENST00000563945 ILKAPQ9H0C8 392 aaPredicted RBP20.22■□□□□ 0.83
HERC2-204ENST00000563945 PTRH2Q9Y3E5 179 aaKnown RBP20.22■□□□□ 0.83
HERC2-204ENST00000563945 KRT86O43790 486 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 IPO13O94829 963 aaKnown RBP20.21■□□□□ 0.83
HERC2-204ENST00000563945 RBP3P10745 1247 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 MARCKSL1P49006 195 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 ZNF140P52738 457 aaPredicted RBP20.21■□□□□ 0.83
HERC2-204ENST00000563945 DCDP81605 110 aaKnown RBP20.21■□□□□ 0.83
HERC2-204ENST00000563945 PLEKHN1Q494U1 663 aaPredicted RBP20.21■□□□□ 0.83
HERC2-204ENST00000563945 C1orf189Q5VU69 101 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 SERPINA9Q86WD7 417 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 ADGRF3Q8IZF5 1079 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 ZADH2Q8N4Q0 377 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 CISD2Q8N5K1 135 aaKnown RBP20.21■□□□□ 0.83
HERC2-204ENST00000563945 C19orf47Q8N9M1 422 aaKnown RBP20.21■□□□□ 0.83
HERC2-204ENST00000563945 SNRNP40Q96DI7 357 aaKnown RBP20.21■□□□□ 0.83
HERC2-204ENST00000563945 AP1M1Q9BXS5 423 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 ASF1AQ9Y294 204 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 B3GNT3Q9Y2A9 372 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 CREBBPQ92793 2442 aa20.21■□□□□ 0.83
HERC2-204ENST00000563945 CCL22O00626 93 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 KDM1AO60341 852 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 ZNF189O75820 626 aaPredicted RBP20.2■□□□□ 0.82
HERC2-204ENST00000563945 SHMT2P34897 504 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 BOP1Q14137 746 aaKnown RBP20.2■□□□□ 0.82
HERC2-204ENST00000563945 SPARCL1Q14515 664 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 NR6A1Q15406 480 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 SPA17Q15506 151 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 C11orf63Q6NUN7 778 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 MAMDC2Q7Z304 686 aaPredicted RBP20.2■□□□□ 0.82
HERC2-204ENST00000563945 MRGPREQ86SM8 312 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 TMTC1Q8IUR5 882 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 GALNT16Q8N428 558 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 CCDC110Q8TBZ0 833 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 C19orf60Q96EN9 201 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 SPATA13Q96N96 652 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 GORASP1Q9BQQ3 440 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 SMARCAL1Q9NZC9 954 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 POLG2Q9UHN1 485 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 TDRKHQ9Y2W6 561 aaKnown RBP20.2■□□□□ 0.82
HERC2-204ENST00000563945 MYO9AB2RTY4 2548 aa20.2■□□□□ 0.82
HERC2-204ENST00000563945 PIKFYVEQ9Y2I7 2098 aa20.19■□□□□ 0.82
HERC2-204ENST00000563945 QSOX1O00391 747 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms