RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 KCTD19Q17RG1 926 aaPredicted RBP13.02□□□□□ -0.33
CLK3-213ENST00000563842 MANEAQ5SRI9 462 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 PLEKHS1Q5SXH7 462 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 TTC23LQ6PF05 361 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 CCDC81Q6ZN84 652 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 OTOAQ7RTW8 1153 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 AMIGO1Q86WK6 493 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 DTX1Q86Y01 620 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 CILP2Q8IUL8 1156 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 SLC22A15Q8IZD6 547 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 SIDT2Q8NBJ9 832 aaKnown RBP13.02□□□□□ -0.33
CLK3-213ENST00000563842 OR52E1Q8NGJ3 308 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 STAMBPL1Q96FJ0 436 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 FCRL3Q96P31 734 aaPredicted RBP13.02□□□□□ -0.33
CLK3-213ENST00000563842 MAP3K3Q99759 626 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 HGH1Q9BTY7 390 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 PRORYQ9H606 182 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 PDE7BQ9NP56 450 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 SIDT1Q9NXL6 827 aaKnown RBP13.02□□□□□ -0.33
CLK3-213ENST00000563842 SEC16AO15027 2179 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 LAMA5O15230 3695 aa13.02□□□□□ -0.33
CLK3-213ENST00000563842 IGHV5-51A0A0C4DH38 117 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 TEX51A0A1B0GUA7 166 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 GSAPA4D1B5 854 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
CLK3-213ENST00000563842 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 GOLGA8TH3BQL2 631 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
CLK3-213ENST00000563842 SLCO2B1O94956 709 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 ZBTB11O95625 1053 aaPredicted RBP13.01□□□□□ -0.33
CLK3-213ENST00000563842 POLR2CP19387 275 aaPredicted RBP13.01□□□□□ -0.33
CLK3-213ENST00000563842 CDH3P22223 829 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 HSD11B2P80365 405 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 PRKG2Q13237 762 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 UNC5DQ6UXZ4 953 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 MAATS1Q7Z4T9 603 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 PDIK1LQ8N165 341 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 KRT222Q8N1A0 295 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 IL22RA1Q8N6P7 574 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLK3-213ENST00000563842 OR5AR1Q8NGP9 310 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 LPGAT1Q92604 370 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 SLC41A2Q96JW4 573 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 FOPNLQ96NB1 174 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 FCRL4Q96PJ5 515 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 OR6C1Q96RD1 312 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 FAM167BQ9BTA0 163 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 C20orf96Q9NUD7 363 aaPredicted RBP13.01□□□□□ -0.33
CLK3-213ENST00000563842 TDRKHQ9Y2W6 561 aaKnown RBP13.01□□□□□ -0.33
CLK3-213ENST00000563842 FAM169AQ9Y6X4 670 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 ANKRD12Q6UB98 2062 aa13.01□□□□□ -0.33
CLK3-213ENST00000563842 ZCWPW2A0A1B0GU75 182 aa13□□□□□ -0.33
CLK3-213ENST00000563842 PIPSLA2A3N6 862 aa13□□□□□ -0.33
CLK3-213ENST00000563842 IQCF5A8MTL0 148 aa13□□□□□ -0.33
CLK3-213ENST00000563842 E5RI56 91 aa13□□□□□ -0.33
CLK3-213ENST00000563842 K7ENP7 123 aa13□□□□□ -0.33
CLK3-213ENST00000563842 FGF5P12034 268 aa13□□□□□ -0.33
CLK3-213ENST00000563842 PKMP14618 531 aaKnown RBP13□□□□□ -0.33
CLK3-213ENST00000563842 PGAM1P18669 254 aa13□□□□□ -0.33
CLK3-213ENST00000563842 CHRM3P20309 590 aa13□□□□□ -0.33
CLK3-213ENST00000563842 MAP4P27816 1152 aaKnown RBP13□□□□□ -0.33
CLK3-213ENST00000563842 FMO4P31512 558 aa13□□□□□ -0.33
CLK3-213ENST00000563842 CSE1LP55060 971 aaKnown RBP13□□□□□ -0.33
CLK3-213ENST00000563842 SPANXN3Q5MJ09 141 aa13□□□□□ -0.33
CLK3-213ENST00000563842 ZNF470Q6ECI4 717 aa13□□□□□ -0.33
CLK3-213ENST00000563842 INO80CQ6PI98 192 aaPredicted RBP13□□□□□ -0.33
CLK3-213ENST00000563842 NAPRTQ6XQN6 538 aa13□□□□□ -0.33
CLK3-213ENST00000563842 PPP1R3BQ86XI6 285 aa13□□□□□ -0.33
CLK3-213ENST00000563842 RASGRP3Q8IV61 690 aa13□□□□□ -0.33
CLK3-213ENST00000563842 NLGN4XQ8N0W4 816 aa13□□□□□ -0.33
CLK3-213ENST00000563842 BBOF1Q8ND07 529 aa13□□□□□ -0.33
CLK3-213ENST00000563842 NLGN4YQ8NFZ3 816 aaPredicted RBP13□□□□□ -0.33
CLK3-213ENST00000563842 MAGEC3Q8TD91 643 aa13□□□□□ -0.33
CLK3-213ENST00000563842 LRRC39Q96DD0 335 aa13□□□□□ -0.33
CLK3-213ENST00000563842 SNF8Q96H20 258 aa13□□□□□ -0.33
CLK3-213ENST00000563842 BIRC8Q96P09 236 aa13□□□□□ -0.33
CLK3-213ENST00000563842 EBNA1BP2Q99848 306 aaKnown RBP13□□□□□ -0.33
CLK3-213ENST00000563842 CTRCQ99895 268 aa13□□□□□ -0.33
CLK3-213ENST00000563842 EFHD1Q9BUP0 239 aa13□□□□□ -0.33
CLK3-213ENST00000563842 SYTL2Q9HCH5 934 aa13□□□□□ -0.33
CLK3-213ENST00000563842 APMAPQ9HDC9 416 aa13□□□□□ -0.33
CLK3-213ENST00000563842 SOHLH2Q9NX45 425 aa13□□□□□ -0.33
CLK3-213ENST00000563842 OR6C2Q9NZP2 312 aa13□□□□□ -0.33
CLK3-213ENST00000563842 POMT2Q9UKY4 750 aa13□□□□□ -0.33
CLK3-213ENST00000563842 RARRES3Q9UL19 164 aa13□□□□□ -0.33
CLK3-213ENST00000563842 CDYLQ9Y232 598 aa13□□□□□ -0.33
CLK3-213ENST00000563842 CRYL1Q9Y2S2 319 aa13□□□□□ -0.33
CLK3-213ENST00000563842 TMEM184BQ9Y519 407 aaPredicted RBP13□□□□□ -0.33
CLK3-213ENST00000563842 COMMD10Q9Y6G5 202 aa13□□□□□ -0.33
CLK3-213ENST00000563842 EFCAB8A8MWE9 144 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 BTN3A1O00481 513 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 TTI1O43156 1089 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 RAD1O60671 282 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms