RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CCDC66A2RUB6 948 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 GSAPA4D1B5 854 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 AGAP14A8MT82 685 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 PMPCBO75439 489 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 JRKO75564 520 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 IPO13O94829 963 aaKnown RBP9.99□□□□□ -0.81
SF3B3-204ENST00000563739 MED26O95402 600 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 PTPN3P26045 913 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 MST1P26927 711 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 KIR3DL1P43629 444 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 XIAPP98170 497 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 ADCY2Q08462 1091 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 WASHC5Q12768 1159 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 MSLNQ13421 630 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-204ENST00000563739 GTF2H3Q13889 308 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 SIRPB2Q5JXA9 342 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 LDLRAP1Q5SW96 308 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 CCDC122Q5T0U0 273 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 PRAMEF13Q5VWM6 474 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 RPUSD3Q6P087 351 aaKnown RBP9.99□□□□□ -0.81
SF3B3-204ENST00000563739 KIRREL2Q6UWL6 708 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 FAM20CQ8IXL6 584 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 NXPE1Q8N323 547 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 C19orf47Q8N9M1 422 aaKnown RBP9.99□□□□□ -0.81
SF3B3-204ENST00000563739 ACVR1CQ8NER5 493 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 GDAP1Q8TB36 358 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-204ENST00000563739 PSMF1Q92530 271 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 RNF157Q96PX1 679 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 OR2A14Q96R47 310 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 BPIFA3Q9BQP9 254 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 NAT10Q9H0A0 1025 aaKnown RBP9.99□□□□□ -0.81
SF3B3-204ENST00000563739 DEF6Q9H4E7 631 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 FANCEQ9HB96 536 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 ACTR10Q9NZ32 417 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 IP6K2Q9UHH9 426 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 ITGB1BP2Q9UKP3 347 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 PADI2Q9Y2J8 665 aa9.99□□□□□ -0.81
SF3B3-204ENST00000563739 HRNRQ86YZ3 2850 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-204ENST00000563739 GLYATL1P3A0A0U1RQE8 302 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 A0A1B0GUH1 482 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 PRICKLE3O43900 615 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 DIAPH2O60879 1101 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 ONECUT2O95948 504 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 CCDC172P0C7W6 258 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 UGT2B7P16662 529 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 MX2P20592 715 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 MMP11P24347 488 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 KDELR1P24390 212 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 HTR1EP28566 365 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 PDHA2P29803 388 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 SOX11P35716 441 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 PRLHRP49683 370 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 WNT3AP56704 352 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 AIMP2Q13155 320 aaKnown RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 BOP1Q14137 746 aaKnown RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 PRKD1Q15139 912 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 NKAIN1Q4KMZ8 207 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 SPESP1Q6UW49 350 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 NCCRP1Q6ZVX7 275 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 DNAJC22Q8N4W6 341 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 CCNYQ8ND76 341 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 DNAJB14Q8TBM8 379 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 PROKR1Q8TCW9 393 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 TM9SF4Q92544 642 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 NR4A3Q92570 626 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 TRIM11Q96F44 468 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 XPO4Q9C0E2 1151 aaKnown RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 CHRNA10Q9GZZ6 450 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 TFB2MQ9H5Q4 396 aaKnown RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 ATP13A2Q9NQ11 1180 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 OLAHQ9NV23 265 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 ACSL5Q9ULC5 683 aa9.98□□□□□ -0.81
SF3B3-204ENST00000563739 MAP1AP78559 2803 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 PRRC2AP48634 2157 aaKnown RBP9.98□□□□□ -0.81
SF3B3-204ENST00000563739 A0A087X0T9 212 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 MATN2O00339 956 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 ZSCAN9O15535 394 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-204ENST00000563739 PROSCO94903 275 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 POLBP06746 335 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 SLC35G4P0C7Q5 338 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 FAM228BP0C875 321 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 NFKB1P19838 968 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 NDUFS1P28331 727 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 CA7P43166 264 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 EFNA3P52797 238 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 DCDP81605 110 aaKnown RBP9.97□□□□□ -0.81
SF3B3-204ENST00000563739 KLHL30Q0D2K2 578 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 CDC16Q13042 620 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 OLIG2Q13516 323 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 PDK2Q15119 407 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 NKG7Q16617 165 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 ARMC6Q6NXE6 501 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 MRGPRGQ86SM5 289 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 ZNF808Q8N4W9 903 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-204ENST00000563739 ZNF655Q8N720 491 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-204ENST00000563739 LMNTD1Q8N9Z9 388 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 PHC3Q8NDX5 983 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
SF3B3-204ENST00000563739 HM13Q8TCT9 377 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms