RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 KCNC3Q14003 757 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 CRYMQ14894 314 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 KLHL26Q53HC5 615 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 FASTKD1Q53R41 847 aaKnown RBP2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 ALFQ53S48 1182 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 MDH1BQ5I0G3 518 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 JAKMIP3Q5VZ66 844 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 HAUS3Q68CZ6 603 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 LACC1Q8IV20 430 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 LSMEM2Q8N112 164 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 OR5AP2Q8NGF4 316 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 OMA1Q96E52 524 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 PGAM5Q96HS1 289 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 PIGQQ9BRB3 760 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 FUCA2Q9BTY2 467 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 ATP13A3Q9H7F0 1226 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 OSER1Q9NX31 292 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 ERAP1Q9NZ08 941 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZDHHC2Q9UIJ5 367 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 KLK13Q9UKR3 277 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 WDR37Q9Y2I8 494 aa2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 ASTN2O75129 1339 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 TDRD9Q8NDG6 1382 aaKnown RBP2.82□□□□□ -1.96
HMGB1P33-201ENST00000563485 AGRNO00468 2067 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 MEX3AA1L020 520 aaKnown RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 GAPDHSO14556 408 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZNF195O14628 629 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 SSX4O60224 188 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 SRSF10O75494 262 aaKnown RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZSCAN5DPP0CG00 497 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 MMP9P14780 707 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 TM4SF1P30408 202 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 MAPK4P31152 587 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 TLX1P31314 330 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 MAN1A1P33908 653 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 SUOXP51687 545 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 SETQ01105 290 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 GLIPR1L2Q4G1C9 344 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 C2CD6Q53TS8 623 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 PAQR6Q6TCH4 344 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 INTS8Q75QN2 995 aaKnown RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 LRRTM1Q86UE6 522 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 MCEMP1Q8IX19 187 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 LMNTD2Q8IXW0 634 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 TRIML1Q8N9V2 468 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 SCFD2Q8WU76 684 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 USP6NLQ92738 828 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 CEP295NLQ96MC4 621 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 OR6C1Q96RD1 312 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 FNBP1Q96RU3 617 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 FTOQ9C0B1 505 aaKnown RBP eCLIP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 S1PR5Q9H228 398 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 PPIL3Q9H2H8 161 aaKnown RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 UNC45AQ9H3U1 944 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 CHMP1AQ9HD42 196 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 OLA1Q9NTK5 396 aaKnown RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 EPHA6Q9UF33 1036 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 MTUS1Q9ULD2 1270 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 EXO1Q9UQ84 846 aaKnown RBP2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 ANGPTL3Q9Y5C1 460 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 CSAG2Q9Y5P2 127 aa2.81□□□□□ -1.96
HMGB1P33-201ENST00000563485 IGKV6D-41A0A0C4DH26 115 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 HYKKA2RU49 373 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 CDRT15L2A8MXV6 281 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 J3KRW8 73 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 NXPH2O95156 264 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 SCGB1D1O95968 90 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 CA6P23280 308 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 HNF4AP41235 474 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 MAMLD1Q13495 774 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 KRT33BQ14525 404 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 NECTIN1Q15223 517 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 E2F5Q15329 346 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 HLA-BQ31612 363 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZNF774Q6NX45 483 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 Q6ZRP5 223 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 PTAR1Q7Z6K3 402 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 HOGA1Q86XE5 327 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 MARVELD2Q8N4S9 558 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 OR13J1Q8NGT2 312 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 OR2AJ1Q8NGZ0 328 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 AZIN2Q96A70 460 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 NSMCE3Q96MG7 304 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 DPAGT1Q9H3H5 408 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 KRT84Q9NSB2 600 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 ZHX1Q9UKY1 873 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 MOB4Q9Y3A3 225 aa2.8□□□□□ -1.96
HMGB1P33-201ENST00000563485 LNP1A1A4G5 178 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 HEPACAM2A8MVW5 462 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 MITFO75030 526 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 CREG1O75629 220 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 UGT1A4P22310 534 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 MMP12P39900 470 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 OPRL1P41146 370 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 GARSP41250 739 aaKnown RBP2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 PDX1P52945 283 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 GSDMDP57764 484 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 TMF1P82094 1093 aa2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 TAF1BQ53T94 588 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P33-201ENST00000563485 FIP1L1Q6UN15 594 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms