RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GPR39O43194 453 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 MFSD11O43934 449 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 OR2B3O76000 313 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 ATP1A3P13637 1013 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 CA4P22748 312 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 SERPINB6P35237 376 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 POLR2FP61218 127 aaKnown RBP7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 ARG2P78540 354 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 TMPRSS15P98073 1019 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 GALNT2Q10471 571 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 PRKAA1Q13131 559 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 BECN1Q14457 450 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 NKG7Q16617 165 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 DEFB110Q30KQ9 67 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 TUBB8Q3ZCM7 444 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 ACAD10Q6JQN1 1059 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 OVCH1Q7RTY7 1134 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 LRRC49Q8IUZ0 686 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 HSCBQ8IWL3 235 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 GPR135Q8IZ08 494 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 ADGRF3Q8IZF5 1079 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 CHDHQ8NE62 594 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 SPATA3Q8NHX4 192 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 BRSK1Q8TDC3 778 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 FKBP10Q96AY3 582 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 TSGA13Q96PP4 275 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 SMR3AQ99954 134 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 SYT11Q9BT88 431 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 CHRNA10Q9GZZ6 450 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC26A1Q9H2B4 701 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 WDR54Q9H977 334 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 PCDH18Q9HCL0 1135 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 NLRC4Q9NPP4 1024 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 RAD18Q9NS91 495 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 CCM2LQ9NUG4 571 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 RBM22Q9NW64 420 aaKnown RBP eCLIP7.43□□□□□ -1.228e-10■■■■■ 33.4
HERPUD1-206ENST00000563343 TAS2R14Q9NYV8 317 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 ATP6V1DQ9Y5K8 247 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 STAB1Q9NY15 2570 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 C17orf113A0A1B0GUU1 675 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 GSAPA4D1B5 854 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 OR2AG2A6NM03 316 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 GAPDHSO14556 408 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ZSCAN9O15535 394 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 SGTAO43765 313 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 RNF8O76064 485 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 RASAL1O95294 804 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 HPP00738 406 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CRYABP02511 175 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ALBP02768 609 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ESRRAP11474 423 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 DESP17661 470 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CCNCP24863 283 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 NDUFS1P28331 727 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ARL4AP40617 200 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CD86P42081 329 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF165P49910 485 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 PPP2R2AP63151 447 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 PMP22Q01453 160 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 RBPJQ06330 500 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CACNG1Q06432 222 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 TFF3Q07654 80 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 GTF2H3Q13889 308 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 SKOR2Q2VWA4 1001 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 HSP90AA4PQ58FG1 418 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 FAM182AQ5T1J6 154 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 IRAK1BP1Q5VVH5 260 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 NCBP2-AS2Q69YL0 99 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 TMEM220Q6QAJ8 160 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CXXC5Q7LFL8 322 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CHERPQ8IWX8 916 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 LILRA3Q8N6C8 439 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF655Q8N720 491 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 BEND7Q8N7W2 519 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CNTD1Q8N815 330 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 C19orf47Q8N9M1 422 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 DDHD1Q8NEL9 900 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ACVR1CQ8NER5 493 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 FLVCR1-AS1Q8TAF5 88 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 DTX3LQ8TDB6 740 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 PHF10Q8WUB8 498 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 LRRN4Q8WUT4 740 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 TEKT4Q8WW24 435 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 NINJ1Q92982 152 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 TADA1Q96BN2 335 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF653Q96CK0 615 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 ARSGQ96EG1 525 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 DMRTA2Q96SC8 542 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 AGPAT1Q99943 283 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 XPO4Q9C0E2 1151 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 MRM3Q9HC36 420 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 PARVAQ9NVD7 372 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 CDC23Q9UJX2 597 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 TTLL3Q9Y4R7 772 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 SPO11Q9Y5K1 396 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 MXRA5Q9NR99 2828 aa7.42□□□□□ -1.22
HERPUD1-206ENST00000563343 NBEAL1Q6ZS30 2694 aa7.41□□□□□ -1.22
HERPUD1-206ENST00000563343 MGAT4DA6NG13 374 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms