RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ENO2P09104 434 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 SLC6A2P23975 617 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 GGT5P36269 586 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 CDKL1Q00532 357 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 ZNF234Q14588 700 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 COQ5Q5HYK3 327 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 METTL2BQ6P1Q9 378 aaKnown RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 ZFP1Q6P2D0 407 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 CYP20A1Q6UW02 462 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 PDSS2Q86YH6 399 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 RAVER1Q8IY67 606 aaKnown RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 MINDY1Q8N5J2 469 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 VPS35Q96QK1 796 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 HOPXQ9BPY8 73 aaPredicted RBP18.69■□□□□ 0.58
SMPD3-203ENST00000563226 SLC32A1Q9H598 525 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 RAD18Q9NS91 495 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 SLAMF8Q9P0V8 285 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 ZNHIT2Q9UHR6 403 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 RIMS3Q9UJD0 308 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 DOCK8Q8NF50 2099 aa18.69■□□□□ 0.58
SMPD3-203ENST00000563226 CCDC154A6NI56 674 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 MANBAO00462 879 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 EEDO75530 441 aaKnown RBP18.68■□□□□ 0.58
SMPD3-203ENST00000563226 SLC6A12P48065 614 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 RPL38P63173 70 aaKnown RBP18.68■□□□□ 0.58
SMPD3-203ENST00000563226 TLR1Q15399 786 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 CDKL4Q5MAI5 379 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 NEK5Q6P3R8 708 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 TSPEARQ8WU66 669 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 COQ10AQ96MF6 247 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 PBX4Q9BYU1 374 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 KLHL4Q9C0H6 718 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 C6orf203Q9P0P8 240 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-203ENST00000563226 ZNF490Q9ULM2 529 aaPredicted RBP18.68■□□□□ 0.58
SMPD3-203ENST00000563226 SZT2Q5T011 3432 aa18.68■□□□□ 0.58
SMPD3-203ENST00000563226 FAM234BA2RU67 622 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 WNT9AO14904 365 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ANKRD28O15084 1053 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 WDR47O94967 919 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 SOD1P00441 154 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 FTH1P02794 183 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 C8BP07358 591 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 SLC2A4P14672 509 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 PREPP48147 710 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 AQP4P55087 323 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 NFYCQ13952 458 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ADGRE1Q14246 886 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 PTCHD3Q3KNS1 767 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 OGFRL1Q5TC84 451 aaPredicted RBP18.67■□□□□ 0.58
SMPD3-203ENST00000563226 VITQ6UXI7 678 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ZFAND4Q86XD8 727 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 OR8D1Q8WZ84 308 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 TIFAQ96CG3 184 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 MTFMTQ96DP5 389 aaKnown RBP18.67■□□□□ 0.58
SMPD3-203ENST00000563226 DTD2Q96FN9 168 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 FAM129BQ96TA1 746 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 PKP2Q99959 881 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 GID8Q9NWU2 228 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 EDDM13A0A1B0GTR0 161 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 K7ESM1 405 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 RNASEH2AO75792 299 aaKnown RBP18.67■□□□□ 0.58
SMPD3-203ENST00000563226 SLCO2B1O94956 709 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 HIST1H2AGP0C0S8 130 aaPredicted RBP18.67■□□□□ 0.58
SMPD3-203ENST00000563226 HIST1H2ADP20671 130 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ATP6V1B2P21281 511 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ITGB7P26010 798 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 CASP2P42575 452 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 TRAP1Q12931 704 aaKnown RBP18.67■□□□□ 0.58
SMPD3-203ENST00000563226 SP140Q13342 867 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 CPSF6Q16630 551 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMPD3-203ENST00000563226 LDLRAP1Q5SW96 308 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 SLC2A7Q6PXP3 512 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 LRRC70Q7Z2Q7 622 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 TRIM74Q86UV6 250 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 RASGRP3Q8IV61 690 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 TERB1Q8NA31 727 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ASZ1Q8WWH4 475 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 USP7Q93009 1102 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 HIST1H2AHQ96KK5 128 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 HIST1H2AJQ99878 128 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 H2AFJQ9BTM1 129 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 TRIM54Q9BYV2 358 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ATG10Q9H0Y0 220 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 NKX2-4Q9H2Z4 354 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 TMEM245Q9H330 911 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 ACTR8Q9H981 624 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 EPS15L1Q9UBC2 864 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 CNOT6Q9ULM6 557 aaKnown RBP18.67■□□□□ 0.58
SMPD3-203ENST00000563226 PCDHA9Q9Y5H5 950 aa18.67■□□□□ 0.58
SMPD3-203ENST00000563226 RFXAPO00287 272 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 KPNA5O15131 536 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 PRAMEF4O60810 478 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 ULK1O75385 1050 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 CLDN9O95484 217 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 CYP2A7P20853 494 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 ITPKAP23677 461 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 TMEM115Q12893 351 aaPredicted RBP18.66■□□□□ 0.58
SMPD3-203ENST00000563226 ABRQ12979 859 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 MAP7D1Q3KQU3 841 aa18.66■□□□□ 0.58
SMPD3-203ENST00000563226 GRAMD1BQ3KR37 738 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms