RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HMOX1P09601 288 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 CTAGE8P0CG41 777 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM106CPP0CH98 169 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 CDH1P12830 882 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 ATP6V1B1P15313 513 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 HOXC13P31276 330 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 GNL1P36915 607 aaPredicted RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 FUT6P51993 359 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 TPD52P55327 224 aaPredicted RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 AP1B1Q10567 949 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 TROAPQ12815 778 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 HSPB3Q12988 150 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 GTF2H2Q13888 395 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 MELKQ14680 651 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 RRS1Q15050 365 aaKnown RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 TMEM35AQ53FP2 167 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 ZRANB3Q5FWF4 1079 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 WBP2NLQ6ICG8 309 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 GTF2H2CQ6P1K8 395 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 GET4Q7L5D6 327 aaPredicted RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 SPATA21Q7Z572 469 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 CUZD1Q86UP6 607 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 HOOK3Q86VS8 718 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 CTAGE4Q8IX94 777 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 MUC20Q8N307 709 aaPredicted RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC5A8Q8N695 610 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 MOSPD2Q8NHP6 518 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 AFAP1L1Q8TED9 768 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 TMEM255BQ8WV15 326 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 KRT35Q92764 455 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 HES6Q96HZ4 224 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 MS4A10Q96PG2 267 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC22A12Q96S37 553 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 PKP4Q99569 1192 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 NEURL2Q9BR09 285 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 C16orf70Q9BSU1 422 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 CSTL1Q9H114 145 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 C2orf40Q9H1Z8 148 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 DPAGT1Q9H3H5 408 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 EVA1AQ9H8M9 152 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 RAB9BQ9NP90 201 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 EQTNQ9NQ60 294 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 MBNL1Q9NR56 388 aaKnown RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 RCC2Q9P258 522 aaKnown RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 ARMCX3Q9UH62 379 aaPredicted RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 TCF20Q9UGU0 1960 aaKnown RBP3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 PRSS51A0A1B0GVH4 220 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 A0A1W2PS18 150 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ASPDHA6ND91 283 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 OR5K3A6NET4 321 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ENO4A6NNW6 628 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ANKRD66B4E2M5 251 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PRAC2D3DTV9 90 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 WDR46O15213 610 aaKnown RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 CLIC2O15247 247 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ST8SIA3O43173 380 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNHIT1O43257 154 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 BUD23O43709 281 aaKnown RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 FMO6PO60774 539 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 WDR1O75083 606 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 GBAP04062 536 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 LINGO3P0C6S8 592 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM58BPP0C7Q3 252 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF23P17027 643 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 GM2AP17900 193 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 POLR2CP19387 275 aaPredicted RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 NR2F2P24468 414 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PTPN3P26045 913 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 HNF4AP41235 474 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PSMC4P43686 418 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF75DP51815 510 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 GAS1P54826 345 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ERVFC1-1P60608 527 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ISL1P61371 349 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 RPL36AP83881 106 aaKnown RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 POU3F1Q03052 451 aaPredicted RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 UBXN1Q04323 297 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PRKAA1Q13131 559 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PPIGQ13427 754 aaKnown RBP eCLIP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 TUBB2AQ13885 445 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 TAZQ16635 292 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 KRTAP27-1Q3LI81 207 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC10A5Q5PT55 438 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PLA2G4FQ68DD2 849 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 IYDQ6PHW0 289 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 PLEKHM3Q6ZWE6 761 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 DET1Q7L5Y6 550 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 SPATA19Q7Z5L4 167 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 TUSC5Q8IXB3 177 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 RFLNBQ8N5W9 214 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 CTCFLQ8NI51 663 aaPredicted RBP3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 BBS10Q8TAM1 723 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 GRK7Q8WTQ7 553 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 SECTM1Q8WVN6 248 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 SEMA4DQ92854 862 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 ST6GALNAC6Q969X2 333 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 SPSB1Q96BD6 273 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 OR6C1Q96RD1 312 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 TUBB2BQ9BVA1 445 aa3.1□□□□□ -1.91
SHCBP1-202ENST00000563219 GTPBP2Q9BX10 602 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms