RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CCDC138Q96M89 665 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 CASD1Q96PB1 797 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 EGFL8Q99944 293 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 KCNH6Q9H252 994 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 CARS2Q9HA77 564 aaKnown RBP12.83□□□□□ -0.36
USB1-207ENST00000563149 LRTM1Q9HBL6 345 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ELOVL2Q9NXB9 296 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 WWOXQ9NZC7 414 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ZMYM5Q9UJ78 669 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 INVSQ9Y283 1065 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 MAN2B2Q9Y2E5 1009 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 ZNF510Q9Y2H8 683 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 PCDHB7Q9Y5E2 793 aa12.83□□□□□ -0.36
USB1-207ENST00000563149 LOC100130705A0A1B0GUX0 176 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 TMX2-CTNND1H3BSU7 103 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 CREG1O75629 220 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 CLPXO76031 633 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 PRPS2P11908 318 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
USB1-207ENST00000563149 ITGALP20701 1170 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 SLC11A1P49279 550 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 FLT3LGP49771 235 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 SGSHP51688 502 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 BMXP51813 675 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 RHOAP61586 193 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 TWF1Q12792 350 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 TRIM32Q13049 653 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 PON2Q15165 354 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 USP39Q53GS9 565 aaKnown RBP12.82□□□□□ -0.36
USB1-207ENST00000563149 RTP2Q5QGT7 225 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 C16orf87Q6PH81 154 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 XKR5Q6UX68 686 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 RNF180Q86T96 592 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 ZC3H7AQ8IWR0 971 aaKnown RBP12.82□□□□□ -0.36
USB1-207ENST00000563149 ZBTB2Q8N680 514 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 MUL1Q969V5 352 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 RHBDF1Q96CC6 855 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 TTPALQ9BTX7 342 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 AMBRA1Q9C0C7 1298 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 RAD21L1Q9H4I0 556 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 NSUN3Q9H649 340 aaKnown RBP12.82□□□□□ -0.36
USB1-207ENST00000563149 KAT8Q9H7Z6 458 aaKnown RBP12.82□□□□□ -0.36
USB1-207ENST00000563149 RMND5AQ9H871 391 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 C1orf109Q9NX04 203 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 KLHL42Q9P2K6 505 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 STOML2Q9UJZ1 356 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 ZNF490Q9ULM2 529 aaPredicted RBP12.82□□□□□ -0.36
USB1-207ENST00000563149 FNDC3AQ9Y2H6 1198 aaKnown RBP12.82□□□□□ -0.36
USB1-207ENST00000563149 PCDHB9Q9Y5E1 797 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 PCDHGB1Q9Y5G3 927 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 ORC6Q9Y5N6 252 aa12.82□□□□□ -0.36
USB1-207ENST00000563149 A0A096LPI6 279 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 MANBAO00462 879 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 B4GAT1O43505 415 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SEC22BO75396 215 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 PRKD3O94806 890 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SLC25A14O95258 325 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 PGLSO95336 258 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 KRT6AP02538 564 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 KRT6BP04259 564 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CBSLP0DN79 551 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ITGAMP11215 1152 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 EPB42P16452 691 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CCND3P30281 292 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 CBSP35520 551 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 KRT6CP48668 564 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 PTPN5P54829 565 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 KCNAB2Q13303 367 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 PTGR1Q14914 329 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 NKG7Q16617 165 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 TTLL9Q3SXZ7 439 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ANKDD1AQ495B1 522 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 GPR33Q49SQ1 333 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SPANXN4Q5MJ08 99 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ZNF691Q5VV52 312 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 MACC1Q6ZN28 852 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 MSANTD1Q6ZTZ1 278 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 C16orf59Q7L2K0 433 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ANKRD13BQ86YJ7 626 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 MSRB3Q8IXL7 192 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ELMOD1Q8N336 334 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 FAM86B1Q8N7N1 296 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 CHPT1Q8WUD6 406 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 FBLIM1Q8WUP2 373 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 PIH1D2Q8WWB5 315 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 FKBP10Q96AY3 582 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 ULK4Q96C45 1275 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 EID2BQ96D98 161 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 MYO19Q96H55 970 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 OR52E6Q96RD3 313 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 HBEGFQ99075 208 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 KLF16Q9BXK1 252 aaPredicted RBP12.81□□□□□ -0.36
USB1-207ENST00000563149 ASB8Q9H765 288 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SMURF2Q9HAU4 748 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
USB1-207ENST00000563149 KLQ9UEF7 1012 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms