RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 CEP97Q8IW35 865 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 TMEM86AQ8N2M4 240 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 NPWQ8N729 165 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 GLB1L3Q8NCI6 653 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 ITCHQ96J02 903 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 SLC2A13Q96QE2 648 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 C17orf62Q9BQA9 187 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 MCMBPQ9BTE3 642 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 C1QTNF7Q9BXJ2 289 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 PRDM8Q9NQV8 689 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 BFARQ9NZS9 450 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 NUP50Q9UKX7 468 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 TDRD15B5MCY1 1934 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 TEX51A0A1B0GUA7 166 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 CNTN5O94779 1100 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 HPRP00739 348 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 KCNA5P22460 613 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 ATP5F1P24539 256 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 PPP1R8Q12972 351 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 IL31Q6EBC2 164 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 RAB43Q86YS6 212 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 RNF34Q969K3 372 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 SMARCD1Q96GM5 515 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 CELF6Q96J87 481 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 RDH12Q96NR8 316 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 COLEC11Q9BWP8 271 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 TKTL2Q9H0I9 626 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 AKTIPQ9H8T0 292 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 TIGARQ9NQ88 270 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 EVLQ9UI08 416 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 CDH9Q9ULB4 789 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 GRIP1Q9Y3R0 1128 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 OAS3Q9Y6K5 1087 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 HMX3A6NHT5 357 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 ATP6V1G2-DDX39BF2Z307 99 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 PLK4O00444 970 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 TFECO14948 347 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 PDPK1O15530 556 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 OR7A10O76100 309 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 MT-ND2P03891 347 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 CASP2P42575 452 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 SLC15A1P46059 708 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 RAD51Q06609 339 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 SNTA1Q13424 505 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 C5orf22Q49AR2 442 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 CERCAMQ5T4B2 595 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 DPY19L3Q6ZPD9 716 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 BHLHA9Q7RTU4 235 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 PID1Q7Z2X4 250 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 MIER2Q8N344 545 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 NSMCE2Q96MF7 247 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 RHNO1Q9BSD3 238 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 RHOJQ9H4E5 214 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 INVSQ9Y283 1065 aa13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 PRG3Q9Y2Y8 225 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-203ENST00000562609 ANKRD12Q6UB98 2062 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 FAM92AA1XBS5 289 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 LEUTXA8MZ59 168 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 H3BMM5 538 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 PRSS23O95084 383 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 PSKH1P11801 424 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 ODC1P11926 461 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 WEE1P30291 646 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 TPI1P60174 286 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 SYT16Q17RD7 645 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 PLEKHG6Q3KR16 790 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 ZNF691Q5VV52 312 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 OVOS1Q6IE37 1185 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 SULT1C3Q6IMI6 304 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 MRPL10Q7Z7H8 261 aaKnown RBP13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 RTN4RL1Q86UN2 441 aaPredicted RBP13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 ZNF567Q8N184 647 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 C19orf60Q96EN9 201 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 TRIM54Q9BYV2 358 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 WDCPQ9H6R7 721 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 UBP1Q9NZI7 540 aa13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 NUFIP1Q9UHK0 495 aaKnown RBP13.77□□□□□ -0.2
GTF3C1-203ENST00000562609 MEIOCA2RUB1 952 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 HS6ST1O60243 411 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 DNTTP04053 509 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 PCSK1P29120 753 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 HCAR3P49019 387 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 DNAJB13P59910 316 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 CD83Q01151 205 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 DENND5AQ6IQ26 1287 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 SYCE2Q6PIF2 218 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 BNIPLQ7Z465 357 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 AMIGO1Q86WK6 493 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 HEXDCQ8WVB3 486 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 METTL2AQ96IZ6 378 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 B3GALT6Q96L58 329 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 MRPL57Q9BQC6 102 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 APOL2Q9BQE5 337 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 ERVK13-1Q9NX77 482 aa13.77□□□□□ -0.21
GTF3C1-203ENST00000562609 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms