RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PRR30Q53SZ7 412 aaPredicted RBP16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 Q8NA96 180 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 PPP1R2P1Q96PQ5 205 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 VPS37BQ9H9H4 285 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 ACTR10Q9NZ32 417 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 LUZP4Q9P127 313 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 SERTAD3Q9UJW9 196 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 ICKQ9UPZ9 632 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 ZNF451Q9Y4E5 1061 aa16.17■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 E7EQ34 232 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 ZNF185O15231 689 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 ZNF749O43361 778 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 HCRTR1O43613 425 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TJP3O95049 919 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 METTL18O95568 372 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TPH1P17752 444 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 CYLC1P35663 651 aaPredicted RBP16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 ATP1A4Q13733 1029 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 DBN1Q16643 649 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 JMJD6Q6NYC1 403 aaPredicted RBP16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 SPESP1Q6UW49 350 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TAS2R42Q7RTR8 314 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 OR5AR1Q8NGP9 310 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TFGQ92734 400 aaPredicted RBP16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 CDKN2AIPNLQ96HQ2 116 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TRIM5Q9C035 493 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 FAM60AQ9NP50 221 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 LUC7LQ9NQ29 371 aaKnown RBP16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 REXO2Q9Y3B8 237 aaKnown RBP16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 PCDHGB7Q9Y5F8 929 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 PRSS21Q9Y6M0 314 aa16.16■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 SPTBP11277 2137 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 A6NL46 340 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 H3BMH7 237 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 KLF7O75840 302 aaPredicted RBP16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TPBGLP0DKB5 382 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 POU6F1Q14863 301 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 ZIC1Q15915 447 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 PARP6Q2NL67 630 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 DEFB110Q30KQ9 67 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 FHL5Q5TD97 284 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 HIST2H2BCQ6DN03 193 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 MED25Q71SY5 747 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TRIM73Q86UV7 250 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 RBMXL3Q8N7X1 1067 aaKnown RBP16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 C19orf47Q8N9M1 422 aaKnown RBP16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 TMEM102Q8N9M5 508 aaPredicted RBP16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 LRRC57Q8N9N7 239 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 FAM71DQ8N9W8 422 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 GLIS1Q8NBF1 620 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 FLVCR1-AS1Q8TAF5 88 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 DPH2Q9BQC3 489 aaPredicted RBP16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 MFRPQ9BY79 579 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 SLC7A5P2Q9GIP4 190 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 LACRTQ9GZZ8 138 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 PIH1D1Q9NWS0 290 aaKnown RBP16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 SHANK1Q9Y566 2161 aa16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 EPN1Q9Y6I3 576 aaPredicted RBP16.15■□□□□ 0.18
VPS9D1-AS1-201ENST00000562298 GRID2IPA4D2P6 1211 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 BTNL10A8MVZ5 291 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 MAP3K7O43318 606 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 DPM1O60762 260 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SEMA7AO75326 666 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 AP2A2O94973 939 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 AGFG2O95081 481 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CTSBP07858 339 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 RNF224P0DH78 156 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 UGT2B7P16662 529 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ACADLP28330 430 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GABRA4P48169 554 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GDF10P55107 478 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 NAP1L1P55209 391 aaKnown RBP16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CACNG1Q06432 222 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 RAPSNQ13702 412 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 INPP5JQ15735 1006 aaPredicted RBP16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SLC6A19Q695T7 634 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ZNF449Q6P9G9 518 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 UNC5AQ6ZN44 842 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 ARHGEF18Q6ZSZ5 1173 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 STYXQ8WUJ0 223 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 LRRC45Q96CN5 670 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CALR3Q96L12 384 aaKnown RBP16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OR2A14Q96R47 310 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SMAD5Q99717 465 aaKnown RBP16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 LRRC40Q9H9A6 602 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SPHK1Q9NYA1 384 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GPR83Q9NYM4 423 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 SMARCAL1Q9NZC9 954 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 FER1L5A0AVI2 2057 aa16.14■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CCDC78A2IDD5 438 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 MROH6A6NGR9 719 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 OR51F1A6NGY5 319 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 TCP11X1B4DZS4 312 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 C9J4A7 227 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 LIN7AO14910 233 aaPredicted RBP16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 HBQ1P09105 142 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 GSTM1P09488 218 aa16.13■□□□□ 0.17
VPS9D1-AS1-201ENST00000562298 CBSLP0DN79 551 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms