RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PEX12O00623 359 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 E2F3O00716 465 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 KRT38O76015 456 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 SRP72O76094 671 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 GYPCP04921 128 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 AGXTP21549 392 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 CSE1LP55060 971 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 KCNK10P57789 538 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 FANCCQ00597 558 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 ITGA9Q13797 1035 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 SPARCL1Q14515 664 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 CYP2A13Q16696 494 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 CRB2Q5IJ48 1285 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 SP5Q6BEB4 398 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 LINC00696Q6ZRV3 163 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 PID1Q7Z2X4 250 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 TAX1BP1Q86VP1 789 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 KCNMB4Q86W47 210 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 ADGRF3Q8IZF5 1079 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 C19orf47Q8N9M1 422 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 CATSPER1Q8NEC5 780 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 ACVR1CQ8NER5 493 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 OR5AR1Q8NGP9 310 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 SLC35G2Q8TBE7 412 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 TFB1MQ8WVM0 346 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 DCUN1D1Q96GG9 259 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 MAGEB10Q96LZ2 347 aaPredicted RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 LRFN5Q96NI6 719 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 FSD1LQ9BXM9 530 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 NAT10Q9H0A0 1025 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 SLC6A20Q9NP91 592 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 RSPH14Q9UHP6 348 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 CRLS1Q9UJA2 301 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 FBXL4Q9UKA2 621 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 ACSL5Q9ULC5 683 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 ICKQ9UPZ9 632 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 PADI2Q9Y2J8 665 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 TDRKHQ9Y2W6 561 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 COLEC10Q9Y6Z7 277 aa11.29□□□□□ -0.6
NSMCE1-202ENST00000561960 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 SMTNL1A8MU46 457 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 CST8O60676 142 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 ALPPP05187 535 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 H2AFZP0C0S5 128 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 UGT2B7P16662 529 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 ALAS2P22557 587 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 MCM3P25205 808 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 PBX1P40424 430 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 MARCKSL1P49006 195 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 ZBED6P86452 979 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 CDC16Q13042 620 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 NAA30Q147X3 362 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 IQCB1Q15051 598 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 SPESP1Q6UW49 350 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 H2AFVQ71UI9 128 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 HOOK3Q86VS8 718 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 AMIGO1Q86WK6 493 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 PRSS58Q8IYP2 241 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 GPR135Q8IZ08 494 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 CLDN19Q8N6F1 224 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 PIH1D1Q9NWS0 290 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 STOX2Q9P2F5 926 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 UVRAGQ9P2Y5 699 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 CCDC168Q8NDH2 2452 aa11.28□□□□□ -0.6
NSMCE1-202ENST00000561960 SCN2AQ99250 2005 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 C2orf74A8MZ97 194 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 KCNJ13O60928 360 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 ITGAXP20702 1163 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 ST13P50502 369 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 XIAPP98170 497 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 SSPNQ14714 243 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 ZRSR2Q15696 482 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 BCL7AQ4VC05 210 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 Q6ZS92 163 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 TAB3Q8N5C8 712 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 ST6GALNAC3Q8NDV1 305 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 DNAJB14Q8TBM8 379 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 HM13Q8TCT9 377 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 FER1L6-AS2Q96M78 137 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 WDR77Q9BQA1 342 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 PITPNM3Q9BZ71 974 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 OR52A5Q9H2C5 316 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 SLC22A11Q9NSA0 550 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 TXLNGQ9NUQ3 528 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 C5AR2Q9P296 337 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 CAPN11Q9UMQ6 739 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 TFR2Q9UP52 801 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 DNMT3AQ9Y6K1 912 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 CPAMD8Q8IZJ3 1885 aa11.27□□□□□ -0.61
NSMCE1-202ENST00000561960 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms