RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 GOT2P00505 430 aaKnown RBP9.98□□□□□ -0.81
CLK3-205ENST00000561673 FTH1P02794 183 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ST6GAL1P15907 406 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 CDH3P22223 829 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ACVR1Q04771 509 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 DNASE1L3Q13609 305 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 TMTC4Q5T4D3 741 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 PRAMEF17Q5VTA0 474 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 LYPLAL1Q5VWZ2 237 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 DRICH1Q6PGQ1 229 aaPredicted RBP9.98□□□□□ -0.81
CLK3-205ENST00000561673 AFTPHQ6ULP2 937 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ATG14Q6ZNE5 492 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ZNF662Q6ZS27 426 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ZNF534Q76KX8 674 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 TMEM126BQ8IUX1 230 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 OR5AR1Q8NGP9 310 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 OR6P1Q8NGX9 317 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 OR8K5Q8NH50 307 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ELMO1Q92556 727 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ABHD17AQ96GS6 310 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 SGSM3Q96HU1 749 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 RUFY1Q96T51 708 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 HGH1Q9BTY7 390 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 GPR87Q9BY21 358 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 TRIM4Q9C037 500 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 TWSG1Q9GZX9 223 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ACTL8Q9H568 366 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 ZNF71Q9NQZ8 489 aaPredicted RBP9.98□□□□□ -0.81
CLK3-205ENST00000561673 CHRAC1Q9NRG0 131 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 DRG1Q9Y295 367 aaKnown RBP9.98□□□□□ -0.81
CLK3-205ENST00000561673 TCAF1Q9Y4C2 921 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 KCNMB2Q9Y691 235 aa9.98□□□□□ -0.81
CLK3-205ENST00000561673 SLC5A10A0PJK1 596 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 C2orf74A8MZ97 194 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 TMEM150CB9EJG8 249 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 QSOX1O00391 747 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 CPNE3O75131 537 aaKnown RBP9.97□□□□□ -0.81
CLK3-205ENST00000561673 WISP1O95388 367 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 RECKO95980 971 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 FGGP02679 453 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 CCDC175P0C221 793 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 OR56A5P0C7T3 313 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 TPBGLP0DKB5 382 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 PTPN4P29074 926 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 KCNC4Q03721 635 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 ABRQ12979 859 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 GPS2Q13227 327 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 SEMA3AQ14563 771 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 KCTD19Q17RG1 926 aaPredicted RBP9.97□□□□□ -0.81
CLK3-205ENST00000561673 PLEKHS1Q5SXH7 462 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 LCN10Q6JVE6 187 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 ZNF517Q6ZMY9 492 aaPredicted RBP9.97□□□□□ -0.81
CLK3-205ENST00000561673 UNC5AQ6ZN44 842 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 NLRP9Q7RTR0 991 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 LRRC8AQ8IWT6 810 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 HOMEZQ8IX15 550 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 OR1L3Q8NH93 324 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 OR5K2Q8NHB8 316 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLK3-205ENST00000561673 TRAPPC9Q96Q05 1148 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 TTC1Q99614 292 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 PITPNM3Q9BZ71 974 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 KLHL25Q9H0H3 589 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 LATS2Q9NRM7 1088 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 ACTR10Q9NZ32 417 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 ICKQ9UPZ9 632 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 ASF1AQ9Y294 204 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 ZKSCAN5Q9Y2L8 839 aa9.97□□□□□ -0.81
CLK3-205ENST00000561673 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
CLK3-205ENST00000561673 CDC14CA4D256 554 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 IQCF5A8MTL0 148 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 MEN1O00255 615 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 MAP3K7O43318 606 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 MSL3P1P0C860 447 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 PVRP15151 417 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 CCR7P32248 378 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 CXCR5P32302 372 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 KCNJ1P48048 391 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 CSE1LP55060 971 aaKnown RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 SESN2P58004 480 aaPredicted RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 RPS18P62269 152 aaKnown RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 PRAMEP78395 509 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 CRADDP78560 199 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 PLOD1Q02809 727 aaPredicted RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 SYTL3Q4VX76 610 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 FASTKD1Q53R41 847 aaKnown RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 ZNF789Q5FWF6 425 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 PCID2Q5JVF3 399 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 SPESP1Q6UW49 350 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 CDHR3Q6ZTQ4 885 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 GSTA5Q7RTV2 222 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 LDB1Q86U70 411 aaPredicted RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 TBC1D21Q8IYX1 336 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 DSELQ8IZU8 1212 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 PPHLN1Q8NEY8 458 aaKnown RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 C9orf43Q8TAL5 461 aaPredicted RBP9.96□□□□□ -0.82
CLK3-205ENST00000561673 PEX13Q92968 403 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 MR1Q95460 341 aa9.96□□□□□ -0.82
CLK3-205ENST00000561673 LRFN5Q96NI6 719 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms