RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 ERO1AQ96HE7 468 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 SLC22A12Q96S37 553 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 PCYT2Q99447 389 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 C16orf70Q9BSU1 422 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 TRAF4Q9BUZ4 470 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 ANKRD2Q9GZV1 360 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 APOBEC3GQ9HC16 384 aaKnown RBP3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 CD93Q9NPY3 652 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 TCF7L2Q9NQB0 619 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 SPHK1Q9NYA1 384 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 TXNDC16Q9P2K2 825 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 MTUS1Q9ULD2 1270 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 FAF1Q9UNN5 650 aaPredicted RBP3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 CGNL1Q0VF96 1302 aa3.33□□□□□ -1.88
CTDSPL2-211ENST00000561189 IGLV5-45A0A087WSX0 123 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 A0A1W2PS18 150 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 C4orf47A7E2U8 309 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 H0Y626 953 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 C16orf97H3BN30 126 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 CCDC188H7C350 402 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 CAPN9O14815 690 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 DDNO94850 711 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 OR52Z1P0C646 297 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 DANCRP0C864 163 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZNF12P17014 697 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 GNAZP19086 355 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ACAT1P24752 427 aaKnown RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ARCN1P48444 511 aaKnown RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 MMP15P51511 669 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 LIMK1P53667 647 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 MAPK12P53778 367 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 CX3CL1P78423 397 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZBTB17Q13105 803 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 FHL1Q13642 323 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ASIC2Q16515 512 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 UGCGQ16739 394 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 SHEQ5VZ18 495 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 CAVIN1Q6NZI2 390 aaKnown RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 SPSB3Q6PJ21 355 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 SIX6OS1Q8N1H7 587 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 NEXN-AS1Q8NBZ9 246 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 SMRP1Q8NCR6 262 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 OR5M8Q8NGP6 311 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 OR13A1Q8NGR1 328 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 GOT1L1Q8NHS2 421 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 LNX1Q8TBB1 728 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 CENPTQ96BT3 561 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZBTB9Q96C00 473 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 SGK494Q96LW2 274 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 OLFM1Q99784 485 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 BTBD10Q9BSF8 475 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 C1QTNF4Q9BXJ3 329 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 SNX25Q9H3E2 840 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 SLA2Q9H6Q3 261 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 EVA1AQ9H8M9 152 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 COPS7BQ9H9Q2 264 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 EBF2Q9HAK2 575 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 PRMT7Q9NVM4 692 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 POLLQ9UGP5 575 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ARMCX3Q9UH62 379 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 ABT1Q9ULW3 272 aaKnown RBP3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 LIPGQ9Y5X9 500 aa3.32□□□□□ -1.88
CTDSPL2-211ENST00000561189 A0A1W2PPW3 197 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 HEPACAM2A8MVW5 462 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 TRIM77I1YAP6 450 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 KCNAB3O43448 404 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 RNASEH1O60930 286 aaKnown RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 RPS6KA5O75582 802 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 PGLSO95336 258 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 SNRNP70P08621 437 aaKnown RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 FGF3P11487 239 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 IRF2P14316 349 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 DGKAP23743 735 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 EPHA2P29317 976 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 HOXC13P31276 330 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 MNDAP41218 407 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 KLC1Q07866 573 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 KIF5AQ12840 1032 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 PPIGQ13427 754 aaKnown RBP eCLIP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZNF273Q14593 569 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 PHKG1Q16816 387 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 SETMARQ53H47 684 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 CAPRIN2Q6IMN6 1127 aaKnown RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 PRR27Q6MZM9 219 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 CASC4Q6P4E1 433 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 DCLRE1AQ6PJP8 1040 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 GDPD4Q6W3E5 623 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 RAD9BQ6WBX8 426 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 ARHGAP22Q7Z5H3 698 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZNF554Q86TJ5 538 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 SLC9B2Q86UD5 537 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 NDUFAF2Q8N183 169 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 CPSF7Q8N684 471 aaKnown RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 POC1AQ8NBT0 407 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 CTCFLQ8NI51 663 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 C9orf43Q8TAL5 461 aaPredicted RBP3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 GDAP1Q8TB36 358 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 SLC26A7Q8TE54 656 aa3.31□□□□□ -1.88
CTDSPL2-211ENST00000561189 RNF128Q8TEB7 428 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms