RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CNPP09543 421 aaKnown RBP16.19■□□□□ 0.18
TPM1-228ENST00000560975 ITGAMP11215 1152 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 HUNKP57058 714 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 GALNT3Q14435 633 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 C18orf21Q32NC0 220 aaPredicted RBP16.19■□□□□ 0.18
TPM1-228ENST00000560975 RFX4Q33E94 735 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 ZFP69Q49AA0 526 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 EFL1Q7Z2Z2 1120 aaKnown RBP16.19■□□□□ 0.18
TPM1-228ENST00000560975 C10orf111Q8N326 155 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 AADATQ8N5Z0 425 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 SLC13A3Q8WWT9 602 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 SLC38A4Q969I6 547 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 GPR21Q99679 349 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 TMEM246Q9BRR3 403 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 TTYH2Q9BSA4 534 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 FBXL12Q9NXK8 326 aa16.19■□□□□ 0.18
TPM1-228ENST00000560975 H3BRB1 525 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 ARNTLO00327 626 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 DSCR3O14972 297 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 ZNF682O95780 498 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 MLYCDO95822 493 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 SLC2A4P14672 509 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 PIK3CGP48736 1102 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 GMPSP49915 693 aaPredicted RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 RAD51Q06609 339 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 MAPKAPK3Q16644 382 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 LIMS2Q7Z4I7 341 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 GALNT7Q86SF2 657 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 KIAA1958Q8N8K9 716 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 TTC29Q8NA56 475 aaPredicted RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 ARRDC4Q8NCT1 418 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 PPP1R2P1Q96PQ5 205 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 ITPAQ9BY32 194 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 NUAK2Q9H093 628 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 AGO3Q9H9G7 860 aaKnown RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 ATP13A1Q9HD20 1204 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 CATSPERZQ9NTU4 200 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 SLC25A37Q9NYZ2 338 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 EHD3Q9NZN3 535 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 FNDC3AQ9Y2H6 1198 aaKnown RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 A0A096LPI6 279 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 LINC00854A0A1B0GVQ3 168 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 CLDN24A6NM45 220 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 MMP2P08253 660 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 C21orf33P30042 268 aaPredicted RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 MRPL19P49406 292 aaKnown RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 ZCCHC8Q6NZY4 707 aaKnown RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 DLK2Q6UY11 383 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 ZFP42Q96MM3 310 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 CDADC1Q9BWV3 514 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 TRIM39Q9HCM9 518 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 DCAF13Q9NV06 445 aaKnown RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 RNF6Q9Y252 685 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 PCDHGB6Q9Y5F9 930 aa16.18■□□□□ 0.18
TPM1-228ENST00000560975 NYNRINQ9P2P1 1898 aaKnown RBP16.18■□□□□ 0.18
TPM1-228ENST00000560975 SCO2O43819 266 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 HAPLN1P10915 354 aaPredicted RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 MYCLP1P12525 358 aaPredicted RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 GRK5P34947 590 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 HK3P52790 923 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 RPL38P63173 70 aaKnown RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 FADDQ13158 208 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 MAD2L1BPQ15013 274 aaPredicted RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 SETMARQ53H47 684 aaPredicted RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 RAB41Q5JT25 222 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 MARC1Q5VT66 337 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 CPZQ66K79 652 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 TUBA3EQ6PEY2 450 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 TTC23LQ6PF05 361 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 RFPL4BQ6ZWI9 263 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 MILR1Q7Z6M3 343 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 ZDHHC21Q8IVQ6 265 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 GALNT12Q8IXK2 581 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 MSRB3Q8IXL7 192 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 BEND7Q8N7W2 519 aaPredicted RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 CLHC1Q8NHS4 586 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 SCAMP5Q8TAC9 235 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 GTF2H4Q92759 462 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 Q96MT0 163 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 APOL4Q9BPW4 351 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 SYTL2Q9HCH5 934 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 TXNRD2Q9NNW7 524 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 SLC6A13Q9NSD5 602 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 ERVK13-1Q9NX77 482 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 ZMYM5Q9UJ78 669 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 CENPXA8MT69 81 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 HHLA1C9JL84 531 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 SCELO95171 688 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 DEFA1P59665 94 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 DEFA3P59666 94 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 ZNF280AP59817 542 aaPredicted RBP16.17■□□□□ 0.18
TPM1-228ENST00000560975 FAM214AQ32MH5 1076 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 SPANXN4Q5MJ08 99 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 CHPFQ8IZ52 775 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 AMER2Q8N7J2 671 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 OR4L1Q8NH43 312 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 SENP8Q96LD8 212 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 ZBED2Q9BTP6 218 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 DERL2Q9GZP9 239 aa16.17■□□□□ 0.18
TPM1-228ENST00000560975 ANKHQ9HCJ1 492 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms