RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 NSMCE3Q96MG7 304 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 SLC2A13Q96QE2 648 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 CCL19Q99731 98 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 RWDD1Q9H446 243 aaPredicted RBP6.19□□□□□ -1.42
HERC1-208ENST00000560462 L2HGDHQ9H9P8 463 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 CYP3A43Q9HB55 503 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 FANCEQ9HB96 536 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 ENAMQ9NRM1 1142 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 IP6K2Q9UHH9 426 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 MKL2Q9ULH7 1088 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 ACTL7AQ9Y615 435 aa6.19□□□□□ -1.42
HERC1-208ENST00000560462 NUP210LQ5VU65 1888 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 CFAP69A5D8W1 941 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 USP27XA6NNY8 438 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 AURKAO14965 403 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 GSTA4O15217 222 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 SNX2O60749 519 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 USP1O94782 785 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 WDPCPO95876 746 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 RPN1P04843 607 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 FYNP06241 537 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 THBDP07204 575 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 UQCRHP07919 91 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 SLC2A3P11169 496 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 AMPD1P23109 780 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 MMP11P24347 488 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 CCND1P24385 295 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 TACR1P25103 407 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 PRPHP41219 470 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 MECP2P51608 486 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 AP3M2P53677 418 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 NR1H2P55055 460 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 NUP107P57740 925 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 FOXL2P58012 376 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 PPP1CAP62136 330 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 UBE2IP63279 158 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 ARF5P84085 180 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 BST2Q10589 180 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 CAPRIN1Q14444 709 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 GOLGA7BQ2TAP0 167 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 TUBB8Q3ZCM7 444 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 ATXN7L2Q5T6C5 722 aaPredicted RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 MARK2Q7KZI7 788 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 GALNT13Q8IUC8 556 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 TRIM48Q8IWZ4 208 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 RPRMLQ8N4K4 120 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 OR10Q1Q8NGQ4 319 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 CCDC110Q8TBZ0 833 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 CALML4Q96GE6 196 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 YIPF2Q9BWQ6 316 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 TRIM7Q9C029 511 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 RAB33BQ9H082 229 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 SHARPINQ9H0F6 387 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 TP63Q9H3D4 680 aaPredicted RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 C12orf65Q9H3J6 166 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 ATP13A1Q9HD20 1204 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 SAMSN1Q9NSI8 373 aaKnown RBP6.18□□□□□ -1.42
HERC1-208ENST00000560462 CDC23Q9UJX2 597 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 DOCK10Q96BY6 2186 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 TENM3Q9P273 2699 aa6.18□□□□□ -1.42
HERC1-208ENST00000560462 LOC100653049A0A140TA62 436 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 A0A1W2PPR1 153 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 GRID2IPA4D2P6 1211 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 OR5H15A6NDH6 313 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 PIK3R2O00459 728 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 TTI1O43156 1089 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 CTIFO43310 598 aaKnown RBP6.17□□□□□ -1.42
HERC1-208ENST00000560462 KRT34O76011 436 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 RHOBTB3O94955 611 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 SOX30O94993 753 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 LCA5LO95447 670 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 CD160O95971 181 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 VIPP01282 170 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 IGHDP01880 384 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 HRGP04196 525 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 FDPSP14324 419 aaKnown RBP6.17□□□□□ -1.42
HERC1-208ENST00000560462 GAP43P17677 238 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 PSMA5P28066 241 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 PTGS2P35354 604 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 PTH2RP49190 550 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 CASP4P49662 377 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 ACOX1Q15067 660 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 DPY19L1Q2PZI1 675 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 SLC25A35Q3KQZ1 300 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 ALFQ53S48 1182 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 TMEM177Q53S58 311 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 ZNF766Q5HY98 468 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 C6orf52Q5T4I8 152 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 AGAP9Q5VTM2 703 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 ZNF385CQ66K41 422 aaPredicted RBP6.17□□□□□ -1.42
HERC1-208ENST00000560462 LIPIQ6XZB0 460 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 SIAH3Q8IW03 269 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 CLEC4CQ8WTT0 213 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 ARHGEF2Q92974 986 aaKnown RBP6.17□□□□□ -1.42
HERC1-208ENST00000560462 FAM149B1Q96BN6 582 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 VPS50Q96JG6 964 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 GDAP1L1Q96MZ0 367 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 PLEKHG4BQ96PX9 1271 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 REG4Q9BYZ8 158 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 OLFML3Q9NRN5 406 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms