RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TRIM43Q96BQ3 446 aaPredicted RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 CENPNQ96H22 339 aaPredicted RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 HIST1H2AHQ96KK5 128 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 VPS35Q96QK1 796 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TSC22D3Q99576 134 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 HIST1H2AJQ99878 128 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 KCTD14Q9BQ13 255 aaPredicted RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 HEPHQ9BQS7 1158 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 H2AFJQ9BTM1 129 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TNKS2Q9H2K2 1166 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 PARVBQ9HBI1 364 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 FBXO10Q9UK96 956 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 SNX6Q9UNH7 406 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 FNDC3AQ9Y2H6 1198 aaKnown RBP9.51□□□□□ -0.89
RTF1-206ENST00000560447 PTGDR2Q9Y5Y4 395 aa9.51□□□□□ -0.89
RTF1-206ENST00000560447 TCRBV5S2A0A599 114 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 GFYI3L273 518 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 MANBAO00462 879 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 PRMT3O60678 531 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 MOSPD3O75425 235 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 RSL1D1O76021 490 aaKnown RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 KCNH1O95259 989 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 FGBP02675 491 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ATP1B2P14415 290 aaPredicted RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 ARSAP15289 507 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 IL1RNP18510 177 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 UGT1A6P19224 532 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 POLR2EP19388 210 aaKnown RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 UGT1A1P22309 533 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 UGT1A4P22310 534 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 UGT1A3P35503 534 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 UGT1A5P35504 534 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 MSX2P35548 267 aaPredicted RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 RPL5P46777 297 aaKnown RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 SLC6A12P48065 614 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 RPIAP49247 311 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 KIAA0040Q15053 153 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 LDLRAP1Q5SW96 308 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 C10orf62Q5T681 223 aaPredicted RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 PDE12Q6L8Q7 609 aaKnown RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 NANOGP8Q6NSW7 305 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 FBXL19Q6PCT2 694 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 BORAQ6PGQ7 559 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 FBXO46Q6PJ61 603 aaPredicted RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 DPY19L3Q6ZPD9 716 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ZBTB49Q6ZSB9 765 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 DPPA4Q7L190 304 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 SPRED1Q7Z699 444 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ADGRG5Q8IZF4 528 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 DDHD1Q8NEL9 900 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 OR6K2Q8NGY2 324 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 MCOLN3Q8TDD5 553 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 DIS3LQ8TF46 1054 aaKnown RBP9.5□□□□□ -0.89
RTF1-206ENST00000560447 ATL1Q8WXF7 558 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ASB11Q8WXH4 323 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 LRTOMTQ8WZ04 291 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 NCSTNQ92542 709 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 FBXL8Q96CD0 374 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ACOX2Q99424 681 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 RAD9AQ99638 391 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 CGREF1Q99674 301 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 HAUS8Q9BT25 410 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ZSCAN5AQ9BUG6 496 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 BBS2Q9BXC9 721 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ANKRD60Q9BZ19 345 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 FAM83DQ9H4H8 585 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 EPHX3Q9H6B9 360 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ZDHHC6Q9H6R6 413 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 COQ10BQ9H8M1 238 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 NANOGQ9H9S0 305 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 LRTM1Q9HBL6 345 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 CD320Q9NPF0 282 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 AGPAT4Q9NRZ5 378 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 C1orf109Q9NX04 203 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ELOVL2Q9NXB9 296 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 THEGQ9P2T0 379 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 B4GALT6Q9UBX8 382 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 GIMAP2Q9UG22 337 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ANAPC2Q9UJX6 822 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 CLEC4EQ9ULY5 219 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 SUFUQ9UMX1 484 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ERVW-1Q9UQF0 538 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 ASB1Q9Y576 335 aa9.5□□□□□ -0.89
RTF1-206ENST00000560447 NOTCH4Q99466 2003 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PCNTO95613 3336 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ZNF839A8K0R7 811 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 UPK3BL1B0FP48 263 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 UPK3BL2E5RIL1 263 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CCL16O15467 120 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 AKAP10O43572 662 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ERN1O75460 977 aaKnown RBP9.49□□□□□ -0.89
RTF1-206ENST00000560447 GMNNO75496 209 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 PAPLNO95428 1278 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 UGT2B4P06133 528 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 RB1P06400 928 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 SPATA31D3P0C874 917 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 ZCCHC18P0CG32 403 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 G6PDP11413 515 aa9.49□□□□□ -0.89
RTF1-206ENST00000560447 CDH1P12830 882 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms