RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 CES3Q6UWW8 571 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 FAM92BQ6ZTR7 304 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 PRICKLE2Q7Z3G6 844 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 LDB1Q86U70 411 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 TMEM135Q86UB9 458 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 LRRC6Q86X45 466 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 KMT5CQ86Y97 462 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 FERD3LQ96RJ6 166 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 TCF12Q99081 682 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 NAPGQ99747 312 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 TWSG1Q9GZX9 223 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 DDX47Q9H0S4 455 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 SLC25A18Q9H1K4 315 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 GPN2Q9H9Y4 310 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 APMAPQ9HDC9 416 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 CDYLQ9Y232 598 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 SAR1BQ9Y6B6 198 aa14.75□□□□□ -0.05
SNRPA1-210ENST00000560383 IGHV5-51A0A0C4DH38 117 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 MATN2O00339 956 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 FANCGO15287 622 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 STAT5AP42229 794 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 PTGIRP43119 386 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 SEPHS1P49903 392 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 ADARP55265 1226 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 PTK6Q13882 451 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 KRT33BQ14525 404 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 IL11RAQ14626 422 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 RNASEH2BQ5TBB1 312 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 MRNIPQ6NTE8 343 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 CYB5D1Q6P9G0 228 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 TIPARPQ7Z3E1 657 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 PPIL6Q8IXY8 311 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 SLC22A15Q8IZD6 547 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 ESX1Q8N693 406 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 PHC3Q8NDX5 983 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 OR4E2Q8NGC2 313 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 OR52E1Q8NGJ3 308 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 ASZ1Q8WWH4 475 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 LCN9Q8WX39 176 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 MAP3K3Q99759 626 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 CTRCQ99895 268 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 TSSK1BQ9BXA7 367 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 CLMPQ9H6B4 373 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 POMT2Q9UKY4 750 aa14.74□□□□□ -0.05
SNRPA1-210ENST00000560383 LOC101059948A0A1B0GTJ6 334 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 CTAGE9A4FU28 777 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 OR6C74A6NCV1 312 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 TERTO14746 1132 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 NDUFS3O75489 264 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 SLCO2B1O94956 709 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 WISP1O95388 367 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 ZIC2O95409 532 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 FGF5P12034 268 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 OGNP20774 298 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 IVDP26440 423 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 AOAHP28039 575 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 TERF1P54274 439 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 POLE2P56282 527 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 SH3BP2P78314 561 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 MC1RQ01726 317 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 PPP1R7Q15435 360 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 ANKRD20A4Q4UJ75 823 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 NAPRTQ6XQN6 538 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 ATG14Q6ZNE5 492 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 SYDE1Q6ZW31 735 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 SDCCAG8Q86SQ7 713 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 TBC1D21Q8IYX1 336 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 AGGF1Q8N302 714 aaeCLIP14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 LKAAEAR1Q8TD35 194 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 LPGAT1Q92604 370 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 SIGLEC10Q96LC7 697 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 RUNDC3BQ96NL0 473 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 BIRC8Q96P09 236 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 SRMSQ9H3Y6 488 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 SAMD15Q9P1V8 674 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 RNF14Q9UBS8 474 aa14.73□□□□□ -0.05
SNRPA1-210ENST00000560383 ZCWPW2A0A1B0GU75 182 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 IQCF5A8MTL0 148 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 GOLGA8MH3BSY2 632 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 BTN3A3O00478 584 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 DNALI1O14645 258 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 SUV39H1O43463 412 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 TPBGLP0DKB5 382 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 PAMP19021 973 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 POLR2CP19387 275 aaPredicted RBP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 CCR10P46092 362 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 CSRP3P50461 194 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 KPNA2P52292 529 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 HSD11B2P80365 405 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 CDC20Q12834 499 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 KCNAB2Q13303 367 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 BRD3Q15059 726 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 SYTL3Q4VX76 610 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 DNAJC21Q5F1R6 531 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 NEPROQ6NW34 567 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 ARMC6Q6NXE6 501 aa14.72□□□□□ -0.05
SNRPA1-210ENST00000560383 CASC4Q6P4E1 433 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms