RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SPATA19Q7Z5L4 167 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 DSG4Q86SJ6 1040 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CUZD1Q86UP6 607 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 P2RY8Q86VZ1 359 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SPPL2CQ8IUH8 684 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FUNDC1Q8IVP5 155 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TCEAL8Q8IYN2 117 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CLYBLQ8N0X4 340 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CLEC4FQ8N1N0 589 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 MIER2Q8N344 545 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF655Q8N720 491 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 NAT16Q8N8M0 369 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TXNDC5Q8NBS9 432 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RCBTB1Q8NDN9 531 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 AGR3Q8TD06 166 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 BLOC1S5Q8TDH9 187 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KCTD4Q8WVF5 259 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FAR1Q8WVX9 515 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 PIK3R3Q92569 461 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RORBQ92753 470 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 PROX1Q92786 737 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FBXW5Q969U6 566 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TBC1D20Q96BZ9 403 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 LRRC58Q96CX6 371 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TSPAN17Q96FV3 270 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 P2RY11Q96G91 374 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FUBP3Q96I24 572 aaKnown RBP eCLIP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FAM46AQ96IP4 442 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CPB2Q96IY4 423 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ZBTB45Q96K62 511 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 MARK4Q96L34 752 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RIPOR3Q96MK2 946 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CCDC115Q96NT0 180 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KCNJ15Q99712 375 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 APOL4Q9BPW4 351 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RBM4BQ9BQ04 359 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KCTD14Q9BQ13 255 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CCDC32Q9BV29 185 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KIFC1Q9BW19 673 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RBM4Q9BWF3 364 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ELOVL4Q9GZR5 314 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SLIRPQ9GZT3 109 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FAM49AQ9H0Q0 323 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TRIT1Q9H3H1 467 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KAT8Q9H7Z6 458 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ARNT2Q9HBZ2 717 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 NGRNQ9NPE2 291 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FBXO28Q9NVF7 368 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CMTM6Q9NX76 183 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 STMN3Q9NZ72 180 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 H2AFY2Q9P0M6 372 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TBC1D14Q9P2M4 693 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 B4GALT6Q9UBX8 382 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 VPS51Q9UID3 782 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 LEF1Q9UJU2 399 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 C3orf18Q9UK00 162 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FBXO5Q9UKT4 447 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 MAGED2Q9UNF1 606 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 PRELID1Q9Y255 219 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RBMX2Q9Y388 322 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TPRKBQ9Y3C4 175 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 MAU2Q9Y6X3 613 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 MGAMO43451 1857 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 TEX51A0A1B0GUA7 166 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 A0A1W2PP18 115 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 CCDC154A6NI56 674 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 AGAP5A6NIR3 686 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 H0Y626 953 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 UPK1AO00322 258 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 ARNTLO00327 626 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 GSTA4O15217 222 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 RAD51BO15315 384 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 INPP4BO15327 924 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 MFSD11O43934 449 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 TRIM3O75382 744 aaPredicted RBP5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 EEDO75530 441 aaKnown RBP5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 CCNKO75909 580 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 IPO13O94829 963 aaKnown RBP5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 KCNK2O95069 426 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 TRIM16O95361 564 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 PF4V1P10720 104 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 PCNAP12004 261 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 HOXB8P17481 243 aaPredicted RBP5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 OXTRP30559 389 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 CLCN5P51795 746 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 COPZ1P61923 177 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 CSNK2BP67870 215 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 CRADDP78560 199 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 PPP2R2BQ00005 443 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 EMX2Q04743 252 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 RAD51Q06609 339 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 CDH17Q12864 832 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 DNASE1L3Q13609 305 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 CAPSQ13938 189 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 KEAP1Q14145 624 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 PRPSAP1Q14558 356 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 ACAP2Q15057 778 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 FAM83EQ2M2I3 478 aa5.86□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF404Q494X3 552 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms