RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 XRCC1P18887 633 aaPredicted RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 MSH3P20585 1137 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 ITGALP20701 1170 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 IDSP22304 550 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 RBMS1P29558 406 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 PBLDP30039 288 aaPredicted RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 CCDC173Q0VFZ6 552 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 CDH17Q12864 832 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 EIF3IQ13347 325 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 NFE2L1Q14494 772 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 CLCA4Q14CN2 919 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 COL28A1Q2UY09 1125 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 BCL7AQ4VC05 210 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 SDK2Q58EX2 2172 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 FNBP1LQ5T0N5 605 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 PHF19Q5T6S3 580 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 AGAP9Q5VTM2 703 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 MRM1Q6IN84 353 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 TTC27Q6P3X3 843 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 ABRAXAS1Q6UWZ7 409 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 SNX20Q7Z614 316 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 LINC00523Q86TU6 105 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 AMZ2Q86W34 360 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 MCATQ8IVS2 390 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 PIANPQ8IYJ0 282 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC35F6Q8N357 371 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 LILRB2Q8N423 598 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 RASGEF1CQ8N431 466 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 FBXO39Q8N4B4 442 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 RCBTB1Q8NDN9 531 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR4D9Q8NGE8 314 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR13J1Q8NGT2 312 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 STYXQ8WUJ0 223 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 MAIP1Q8WWC4 291 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 CDKN2AIPNLQ96HQ2 116 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 NAF1Q96HR8 494 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 MS4A14Q96JA4 679 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 CCDC74BQ96LY2 380 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 TBC1D10AQ9BXI6 508 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 STN1Q9H668 368 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 CASS4Q9NQ75 786 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 THSD1Q9NS62 852 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 POT1Q9NUX5 634 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 SMARCAL1Q9NZC9 954 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 OGFRQ9NZT2 677 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 PDP2Q9P2J9 529 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 SLC2A6Q9UGQ3 507 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 RALYQ9UKM9 306 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 JRKLQ9Y4A0 524 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 CFAP46Q8IYW2 2715 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 MN1Q10571 1320 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 USP27XA6NNY8 438 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 E7EVH7 732 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 HGSO14964 777 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZW10O43264 779 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 KCNJ13O60928 360 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 APRTP07741 180 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 JMJD7P0C870 316 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 CCL4P13236 92 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 VCLP18206 1134 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ACRV1P26436 265 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 FOXN2P32314 431 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ABCG1P45844 678 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PRLHRP49683 370 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TLE3Q04726 772 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TRA2AQ13595 282 aaKnown RBP eCLIP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 GPR18Q14330 331 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 GPR33Q49SQ1 333 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZNF658BQ4V348 819 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZRANB3Q5FWF4 1079 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 METRNLQ641Q3 311 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 FDX2Q6P4F2 183 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 WDR74Q6RFH5 385 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 VHLLQ6RSH7 139 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PPP1R21Q6ZMI0 780 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TMEM26Q6ZUK4 368 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZNF534Q76KX8 674 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 SERPINA9Q86WD7 417 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TRIM48Q8IWZ4 208 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 SPACA3Q8IXA5 215 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 LILRA3Q8N6C8 439 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 DNAAF3Q8N9W5 541 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 AVL9Q8NBF6 648 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZNF248Q8NDW4 579 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 GPR150Q8NGU9 434 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR2L2Q8NH16 312 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR10G6Q8NH81 332 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 COG1Q8WTW3 980 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ISL2Q96A47 359 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 TMEM159Q96B96 161 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 SH3KBP1Q96B97 665 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ULK4Q96C45 1275 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZNF514Q96K75 400 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 PBKQ96KB5 322 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 LINC00615Q96LM1 132 aaPredicted RBP5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 ZNF778Q96MU6 729 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 RANBP9Q96S59 729 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 COPS8Q99627 209 aa5.89□□□□□ -1.47
CTDSPL2-204ENST00000558966 CMKLR1Q99788 373 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms