RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SCHIP1Q9P0W5 487 aaPredicted RBP17.63■□□□□ 0.41
CLPX-203ENST00000558958 ASF1AQ9Y294 204 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 ZFC3H1O60293 1989 aaKnown RBP17.63■□□□□ 0.41
CLPX-203ENST00000558958 NEMP2A6NFY4 417 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 SUPT3HB4E1H0 165 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 FFAR2O15552 330 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 SMIM24O75264 130 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 SUPT3HO75486 399 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 KCNA4P22459 653 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 ALDH3A1P30838 453 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 HALP42357 657 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 RXRGP48443 463 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 RPIAP49247 311 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 GYS2P54840 703 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 IL9RQ01113 521 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 GRIK2Q13002 908 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.63■□□□□ 0.41
CLPX-203ENST00000558958 SLC23A3Q6PIS1 610 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 C10orf107Q8IVU9 208 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 ZNF548Q8NEK5 533 aaPredicted RBP17.63■□□□□ 0.41
CLPX-203ENST00000558958 LMX1AQ8TE12 382 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 C12orf66Q96MD2 445 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 ELF4Q99607 663 aaPredicted RBP17.63■□□□□ 0.41
CLPX-203ENST00000558958 TRIM54Q9BYV2 358 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 OXSMQ9NWU1 459 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 NUDT4Q9NZJ9 180 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 RAB23Q9ULC3 237 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 PCDHGA5Q9Y5G8 931 aa17.63■□□□□ 0.41
CLPX-203ENST00000558958 CFAP20Q9Y6A4 193 aaKnown RBP17.63■□□□□ 0.41
CLPX-203ENST00000558958 PI4KAP42356 2102 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 WDR91A4D1P6 747 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 A8MT66 165 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 PATE3B3GLJ2 98 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 AQP9O43315 295 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 KLK8O60259 260 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 PIAS2O75928 621 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 HIST1H2AGP0C0S8 130 aaPredicted RBP17.62■□□□□ 0.41
CLPX-203ENST00000558958 F3P13726 295 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 HIST1H2ADP20671 130 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 MAP4P27816 1152 aaKnown RBP17.62■□□□□ 0.41
CLPX-203ENST00000558958 BDKRB1P46663 353 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 AP1S2P56377 157 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 CDKL1Q00532 357 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 NFKB2Q00653 900 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 TCF15Q12870 199 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 RPE65Q16518 533 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 ZNF423Q2M1K9 1284 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 CDKL4Q5MAI5 379 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 GKN2Q86XP6 184 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 NUDCD3Q8IVD9 361 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 SDR16C5Q8N3Y7 309 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 PHC3Q8NDX5 983 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 PRSS33Q8NF86 280 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 OR5AR1Q8NGP9 310 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 OR5K2Q8NHB8 316 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 CCDC126Q96EE4 140 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 HIST1H2AHQ96KK5 128 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 HIST1H2AJQ99878 128 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 H2AFJQ9BTM1 129 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 CD274Q9NZQ7 290 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 SIRPGQ9P1W8 387 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 TMCO1Q9UM00 188 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 SLC6A14Q9UN76 642 aa17.62■□□□□ 0.41
CLPX-203ENST00000558958 NCF1BA6NI72 391 aaPredicted RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 OR52A4PA6NMU1 304 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 NCF1CA8MVU1 366 aaPredicted RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 IPO13O94829 963 aaKnown RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 SLC34A2O95436 690 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 RPN2P04844 631 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 GFAPP14136 432 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 NCF1P14598 390 aaPredicted RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 MPLP40238 635 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 MDH1P40925 334 aaKnown RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 ARRB1P49407 418 aaPredicted RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 PRKAA2P54646 552 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 GUCY1A3Q02108 690 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 SHBQ15464 509 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 PFKFB4Q16877 469 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 CCSMST1Q4G0I0 132 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 TRIM61Q5EBN2 209 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 DUS1LQ6P1R4 473 aaKnown RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 IYDQ6PHW0 289 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 TAX1BP1Q86VP1 789 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 SLC22A9Q8IVM8 553 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 DCUN1D3Q8IWE4 304 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 TBC1D21Q8IYX1 336 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 FBXO39Q8N4B4 442 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 PDPRQ8NCN5 879 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 MAGEC3Q8TD91 643 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 DYDC1Q8WWB3 177 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 PHF21BQ96EK2 531 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 TRIT1Q9H3H1 467 aaKnown RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 FSCN3Q9NQT6 498 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 IMP3Q9NV31 184 aaKnown RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 ARL15Q9NXU5 204 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 HEBP2Q9Y5Z4 205 aa17.61■□□□□ 0.41
CLPX-203ENST00000558958 TDRD6O60522 2096 aaKnown RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 TP53BP1Q12888 1972 aaPredicted RBP17.61■□□□□ 0.41
CLPX-203ENST00000558958 DNAH14Q0VDD8 3507 aa17.6■□□□□ 0.41
CLPX-203ENST00000558958 PABPN1LA6NDY0 278 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms