RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 HOOK3Q86VS8 718 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 TMEM151BQ8IW70 566 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 TRIM48Q8IWZ4 208 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 DENND1AQ8TEH3 1009 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 SLC41A2Q96JW4 573 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 C16orf45Q96MC5 204 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 IL17FQ96PD4 163 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 FERD3LQ96RJ6 166 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 MCMBPQ9BTE3 642 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 HGH1Q9BTY7 390 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 EPB41L1Q9H4G0 881 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 ZNF768Q9H5H4 540 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 TFB2MQ9H5Q4 396 aaKnown RBP12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 LATS2Q9NRM7 1088 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 PCDHGA3Q9Y5H0 932 aa12.28□□□□□ -0.44
RABGGTA-207ENST00000558936 HEATR5BQ9P2D3 2071 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 KLHL33A6NCF5 533 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 B4E171 279 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 H3BMH7 237 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 NRP2O60462 931 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 SLC35G4P0C7Q5 338 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 OR56A5P0C7T3 313 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 PVRP15151 417 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 AMD1P17707 334 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 OGNP20774 298 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 CASQ1P31415 396 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 TSPAN7P41732 249 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 HALP42357 657 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 GABRA4P48169 554 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 TTPAP49638 278 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 EIF3BP55884 814 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 HSPA14Q0VDF9 509 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 ABRQ12979 859 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 LAMB3Q13751 1172 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 MORF4L2Q15014 288 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 ZXDCQ2QGD7 858 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 BBS9Q3SYG4 887 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 RBM20Q5T481 1227 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 PRAMEF17Q5VTA0 474 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 LYPLAL1Q5VWZ2 237 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 KIAA1614Q5VZ46 1190 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 CNTN4Q8IWV2 1026 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 RBM12BQ8IXT5 1001 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 SLC38A9Q8NBW4 561 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 AGBL5Q8NDL9 886 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 ZFPM2Q8WW38 1151 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 KCNE4Q8WWG9 221 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 DLG3Q92796 817 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 STAMBPL1Q96FJ0 436 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 DPH1Q9BZG8 443 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 CPNE5Q9HCH3 593 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 FAM60AQ9NP50 221 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 HRASLS2Q9NWW9 162 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 PILRAQ9UKJ1 303 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 IKZF3Q9UKT9 509 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 PSAT1Q9Y617 370 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 IGSF10Q6WRI0 2623 aa12.27□□□□□ -0.45
RABGGTA-207ENST00000558936 MAGEB16A2A368 324 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 AP3B1O00203 1094 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 AHSGP02765 367 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 FTH1P02794 183 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 ST6GAL1P15907 406 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 NELFEP18615 380 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 F8A1P23610 371 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 PRDX3P30048 256 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 PPM1FP49593 454 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 TEDDM1Q5T9Z0 273 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 ARMC3Q5W041 872 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 ZNF470Q6ECI4 717 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 IRGCQ6NXR0 463 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 CASC4Q6P4E1 433 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 SYDE1Q6ZW31 735 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 TRIM73Q86UV7 250 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 ANKMY2Q8IV38 441 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 NOA1Q8NC60 698 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 C2CD4AQ8NCU7 369 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 LRRN4CLQ8ND94 238 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 OR5K2Q8NHB8 316 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 NKD1Q969G9 470 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 OR2A14Q96R47 310 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 TAAR9Q96RI9 348 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 ERP44Q9BS26 406 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 PITPNM3Q9BZ71 974 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 B3GNT4Q9C0J1 378 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 KLHL25Q9H0H3 589 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 DPH5Q9H2P9 285 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 FBXO8Q9NRD0 319 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 IARS2Q9NSE4 1012 aaKnown RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 MOCS1Q9NZB8 636 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 AKAP7Q9P0M2 348 aaPredicted RBP12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 FBXO5Q9UKT4 447 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 POMT2Q9UKY4 750 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 MAD1L1Q9Y6D9 718 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 SEC16AO15027 2179 aa12.26□□□□□ -0.45
RABGGTA-207ENST00000558936 CACNA1GO43497 2377 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms