RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 GSDMDP57764 484 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 MAT1AQ00266 395 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 SCN1BQ07699 218 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ZNF415Q09FC8 603 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 AP1B1Q10567 949 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 DLG1Q12959 904 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GAGE2BQ13066 116 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ZBTB17Q13105 803 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ITGA7Q13683 1181 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ZNF234Q14588 700 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SLC39A14Q15043 492 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CALCRLQ16602 461 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 TAZQ16635 292 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 TYSND1Q2T9J0 566 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GAGE2EQ4V326 116 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 EFHC1Q5JVL4 640 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SPDYCQ5MJ68 293 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 C6orf136Q5SQH8 315 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 NDUFAF5Q5TEU4 345 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PRR27Q6MZM9 219 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GAGE2AQ6NT46 116 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 MFSD12Q6NUT3 480 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 KLC3Q6P597 504 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 FAM171BQ6P995 826 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PLXDC2Q6UX71 529 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 NHLRC1Q6VVB1 395 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 DET1Q7L5Y6 550 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 NUP54Q7Z3B4 507 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PIWIL4Q7Z3Z4 852 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 CCDC91Q7Z6B0 441 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 HOOK3Q86VS8 718 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PTOV1Q86YD1 416 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CFAP206Q8IYR0 622 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 RNF113BQ8IZP6 322 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 APCDD1Q8J025 514 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SFRP1Q8N474 314 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 NHLRC2Q8NBF2 726 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CLEC18CQ8NCF0 446 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 DBF4BQ8NFT6 615 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 LILRB1Q8NHL6 650 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 EXD1Q8NHP7 514 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 B4GALNT2Q8NHY0 566 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 VANGL1Q8TAA9 524 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 FGFBP3Q8TAT2 258 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GRAPLQ8TC17 118 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 GRK7Q8WTQ7 553 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 FAM216AQ8WUB2 273 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 HEXDCQ8WVB3 486 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 DNAAF4Q8WXU2 420 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 KRT35Q92764 455 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 FAM162AQ96A26 154 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SLAMF9Q96A28 289 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 MOB3AQ96BX8 217 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 MTBPQ96DY7 904 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 MTERF3Q96E29 417 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 LINGO1Q96FE5 620 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 BSCL2Q96G97 398 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 SPAG5Q96R06 1193 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 FEVQ99581 238 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SEPHS2Q99611 448 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 RAD9AQ99638 391 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 TMEM79Q9BSE2 394 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 LMF2Q9BU23 707 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 MMTAG2Q9BU76 263 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 TRAF4Q9BUZ4 470 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 CACNG6Q9BXT2 260 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 FUT8Q9BYC5 575 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SEZ6LQ9BYH1 1024 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SLC2A11Q9BYW1 496 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GAREM1Q9H706 876 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PCDH9Q9HC56 1237 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ACKR4Q9NPB9 350 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PIH1D3Q9NQM4 214 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 TCP11L1Q9NUJ3 509 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 DPP3Q9NY33 737 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 TBC1D7Q9P0N9 293 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SEPT10Q9P0V9 454 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GAGE2DQ9UEU5 116 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ARMCX3Q9UH62 379 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 IL17BQ9UHF5 180 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CPSF3Q9UKF6 684 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 RALYQ9UKM9 306 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 MTUS1Q9ULD2 1270 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PCDHA7Q9UN72 937 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 NFS1Q9Y697 457 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PCDH11YQ9BZA8 1340 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GREB1LQ9C091 1923 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 MYH14Q7Z406 1995 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 IGLV5-37A0A075B6J1 123 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 IGKV2D-30A0A075B6S6 120 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 A0A087WV48 116 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 A0A0A6YYC8 382 aaPredicted RBP1.55□□□□□ -2.16
USP3-209ENST00000558925 ELOVL7A1L3X0 281 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 HTR3EA5X5Y0 456 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 NEMP2A6NFY4 417 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 C5orf52A6NGY3 159 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 LILRA5A6NI73 299 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 CD8B2A6NJW9 211 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 C4orf47A7E2U8 309 aa1.55□□□□□ -2.16
USP3-209ENST00000558925 HNRNPCL2B2RXH8 293 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms