RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SPNS2Q8IVW8 549 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 LSMEM2Q8N112 164 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 MMGT1Q8N4V1 131 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 ZBTB2Q8N680 514 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 KDF1Q8NAX2 398 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 SIDT2Q8NBJ9 832 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 AGBL5Q8NDL9 886 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 OR5K2Q8NHB8 316 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 PYROXD1Q8WU10 500 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 ZFPM2Q8WW38 1151 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 ZDHHC12Q96GR4 267 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 C9orf72Q96LT7 481 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 SLC46A1Q96NT5 459 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 NDNQ99608 321 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 THSD1Q9NS62 852 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 PCDHGA8Q9Y5G5 932 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 ADAMTS20P59510 1910 aa15.42■□□□□ 0.06
RABGGTA-206ENST00000558649 ASPMQ8IZT6 3477 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 TLX3O43711 291 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 SLCO2B1O94956 709 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 C9P02748 559 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 ITGA2BP08514 1039 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 PRKAA1Q13131 559 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 CUL1Q13616 776 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 PLEKHS1Q5SXH7 462 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 CACHD1Q5VU97 1274 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 ZDHHC24Q6UX98 284 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 ARHGAP22Q7Z5H3 698 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 PALM2Q8IXS6 379 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 TBC1D21Q8IYX1 336 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 CEP112Q8N8E3 955 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 NAF1Q96HR8 494 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 SLC30A3Q99726 388 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 ASCL3Q9NQ33 180 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 WDR70Q9NW82 654 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 OCIAD1Q9NX40 245 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 ZFATQ9P243 1243 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 PDP2Q9P2J9 529 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 DKK4Q9UBT3 224 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 ICKQ9UPZ9 632 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 NFS1Q9Y697 457 aa15.41■□□□□ 0.06
RABGGTA-206ENST00000558649 WDFY3Q8IZQ1 3526 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 CHD8Q9HCK8 2581 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 TAF4O00268 1085 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 BTN3A1O00481 513 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 EIF3HO15372 352 aaKnown RBP eCLIP15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 DXOO77932 396 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 RPN2P04844 631 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 FGF3P11487 239 aaPredicted RBP15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 BDKRB1P46663 353 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 CLCN7P51798 805 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 MGAT5Q09328 741 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 ACSBG2Q5FVE4 666 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 RBM20Q5T481 1227 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 TEDDM1Q5T9Z0 273 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 AMIGO1Q86WK6 493 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 CNTN4Q8IWV2 1026 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 GIMAP7Q8NHV1 300 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 USP7Q93009 1102 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 ZNF578Q96N58 590 aaPredicted RBP15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 GPR21Q99679 349 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 AARSD1Q9BTE6 412 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 POLG2Q9UHN1 485 aa15.4■□□□□ 0.06
RABGGTA-206ENST00000558649 BTN3A3O00478 584 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 PRAMEF10O60809 474 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 VPS26AO75436 327 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 PIAS1O75925 651 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 AHSGP02765 367 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 GABRB3P28472 473 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 SSTR1P30872 391 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 SLC5A2P31639 672 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 PCBP4P57723 403 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 ERVPABLB-1P60509 514 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 TTLL9Q3SXZ7 439 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 FBXO38Q6PIJ6 1188 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 UNC5DQ6UXZ4 953 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 KIAA0408Q6ZU52 694 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 DCUN1D3Q8IWE4 304 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 GPATCH11Q8N954 259 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 IFT81Q8WYA0 676 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 KCNJ9Q92806 393 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 FGF11Q92914 225 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 PMEPA1Q969W9 287 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 PPM1MQ96MI6 270 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 FOPNLQ96NB1 174 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 MAP3K3Q99759 626 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 CTRCQ99895 268 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 RAB33BQ9H082 229 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 TFB2MQ9H5Q4 396 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 SLC39A1Q9NY26 324 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 EPHA6Q9UF33 1036 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 DMGDHQ9UI17 866 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 MED16Q9Y2X0 877 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 COMMD10Q9Y6G5 202 aa15.39■□□□□ 0.05
RABGGTA-206ENST00000558649 IGHV5-51A0A0C4DH38 117 aa15.38■□□□□ 0.05
RABGGTA-206ENST00000558649 KRT87PA6NCN2 255 aa15.38■□□□□ 0.05
RABGGTA-206ENST00000558649 TLCD2A6NGC4 264 aa15.38■□□□□ 0.05
RABGGTA-206ENST00000558649 CDRT15L2A8MXV6 281 aa15.38■□□□□ 0.05
RABGGTA-206ENST00000558649 KDM1AO60341 852 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms