RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ASAH2Q9NR71 780 aa5.85□□□□□ -1.47
RTF1-204ENST00000558117 RRN3Q9NYV6 651 aa5.85□□□□□ -1.47
RTF1-204ENST00000558117 NLKQ9UBE8 527 aa5.85□□□□□ -1.47
RTF1-204ENST00000558117 CACNG4Q9UBN1 327 aa5.85□□□□□ -1.47
RTF1-204ENST00000558117 INSL5Q9Y5Q6 135 aa5.85□□□□□ -1.47
RTF1-204ENST00000558117 UBIAD1Q9Y5Z9 338 aa5.85□□□□□ -1.47
RTF1-204ENST00000558117 KIAA1549LQ6ZVL6 1849 aa5.85□□□□□ -1.47
RTF1-204ENST00000558117 RTTNQ86VV8 2226 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 PKD1L1Q8TDX9 2849 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 ZNF469Q96JG9 3925 aaPredicted RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 TMEM247A6NEH6 219 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 SGK1O00141 431 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 PRRG1O14668 218 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 MAGEB2O15479 319 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 ANP32CO43423 234 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 CBX6O95503 412 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 ALPLP05186 524 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 HOXB2P14652 356 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 PRKCHP24723 683 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 MLH1P40692 756 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 HTR6P50406 440 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 ROR1Q01973 937 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 WASHC2DQ5SRD0 308 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 CAPRIN2Q6IMN6 1127 aaKnown RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 ZSCAN25Q6NSZ9 544 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 SLC16A12Q6ZSM3 486 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 CCDC60Q8IWA6 550 aaPredicted RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 ZCCHC9Q8N567 271 aaKnown RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 SETD9Q8NE22 299 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 NCSTNQ92542 709 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 SGF29Q96ES7 293 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 CCNL2Q96S94 520 aaPredicted RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 REEP2Q9BRK0 252 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 IFT27Q9BW83 186 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 SF3B5Q9BWJ5 86 aaKnown RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 GCOM2Q9BZD3 368 aaPredicted RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 B3GNT4Q9C0J1 378 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 CXorf56Q9H5V9 222 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 UBN1Q9NPG3 1134 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 SIRT3Q9NTG7 399 aaPredicted RBP5.84□□□□□ -1.47
RTF1-204ENST00000558117 OSGIN2Q9Y236 505 aa5.84□□□□□ -1.47
RTF1-204ENST00000558117 UBE4BO95155 1302 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 LRRK1Q38SD2 2015 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 RPS10-NUDT3A0A1W2PQS6 291 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 ZBTB5O15062 677 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 TMCC1O94876 653 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 CCNE2O96020 404 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 PYGLP06737 847 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 TNNT1P13805 278 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 RRM1P23921 792 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 TMOD1P28289 359 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 TKTP29401 623 aaKnown RBP5.83□□□□□ -1.48
RTF1-204ENST00000558117 HOXA11P31270 313 aaPredicted RBP5.83□□□□□ -1.48
RTF1-204ENST00000558117 ELF1P32519 619 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 GJC1P36383 396 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 ENTPD1P49961 510 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 PGGT1BP53609 377 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 ANKRD1Q15327 319 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 WDR45BQ5MNZ6 344 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 Q5PR19 223 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 TMEM268Q5VZI3 342 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 SLC8B1Q6J4K2 584 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 TMEM71Q6P5X7 295 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 KRT77Q7Z794 578 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 CAMK1DQ8IU85 385 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 SLC34A3Q8N130 599 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 ELMOD1Q8N336 334 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 ALLCQ8N6M5 410 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 IL17RCQ8NAC3 791 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 ASB5Q8WWX0 329 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 EXOC4Q96A65 974 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 WDR77Q9BQA1 342 aaPredicted RBP5.83□□□□□ -1.48
RTF1-204ENST00000558117 POLDIP3Q9BY77 421 aaKnown RBP5.83□□□□□ -1.48
RTF1-204ENST00000558117 API5Q9BZZ5 524 aaKnown RBP5.83□□□□□ -1.48
RTF1-204ENST00000558117 ISCUQ9H1K1 167 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 STN1Q9H668 368 aaKnown RBP5.83□□□□□ -1.48
RTF1-204ENST00000558117 AGPAT5Q9NUQ2 364 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 RAP2CQ9Y3L5 183 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 NFE2L3Q9Y4A8 694 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 CEP192Q8TEP8 1941 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 MYO16Q9Y6X6 1858 aa5.83□□□□□ -1.48
RTF1-204ENST00000558117 NFASCO94856 1347 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 A0A1B0GVT2 93 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 TCRBV21S2A2A0A5A6 115 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 A6NCN8 305 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 PEX12O00623 359 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 PAPSS1O43252 624 aaPredicted RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 SYNCRIPO60506 623 aaKnown RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 LDOC1O95751 146 aaPredicted RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 UNGP13051 313 aaPredicted RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 GABRG2P18507 467 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 GNLYP22749 145 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 CDKN2AP42771 156 aaKnown RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 CCR5P51681 352 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 TWF1Q12792 350 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 ITGB3BPQ13352 177 aaPredicted RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 DRP2Q13474 957 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 PDE1CQ14123 709 aaPredicted RBP5.82□□□□□ -1.48
RTF1-204ENST00000558117 KIF19Q2TAC6 998 aa5.82□□□□□ -1.48
RTF1-204ENST00000558117 ZSCAN23Q3MJ62 389 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms