RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 IRGCQ6NXR0 463 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 FOXR1Q6PIV2 292 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 ZC3HC1Q86WB0 502 aaKnown RBP13.95□□□□□ -0.18
USP3-205ENST00000557884 SLITRK4Q8IW52 837 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 CPNE9Q8IYJ1 553 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 RCBTB1Q8NDN9 531 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 ACVR1CQ8NER5 493 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 OR4E2Q8NGC2 313 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 MRRFQ96E11 262 aaKnown RBP13.95□□□□□ -0.18
USP3-205ENST00000557884 CCDC74BQ96LY2 380 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 TMEM74Q96NL1 305 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 TGM7Q96PF1 710 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 OLFM1Q99784 485 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 TSPYL1Q9H0U9 437 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 EPB41L1Q9H4G0 881 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 LATS2Q9NRM7 1088 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 TAS2R13Q9NYV9 303 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 TXNDC16Q9P2K2 825 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP3-205ENST00000557884 MSRB2Q9Y3D2 182 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 V9GYY5 206 aaPredicted RBP13.95□□□□□ -0.18
USP3-205ENST00000557884 RP1P56715 2156 aa13.95□□□□□ -0.18
USP3-205ENST00000557884 WDFY3Q8IZQ1 3526 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 FAM95CA0A1B0GW59 222 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 PMS2P1A4D2B8 440 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 KRT87PA6NCN2 255 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 CAPN5O15484 640 aaPredicted RBP13.94□□□□□ -0.18
USP3-205ENST00000557884 FAM155BO75949 473 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 FAM153BP0C7A2 387 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 MYBL2P10244 700 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 POLR2CP19387 275 aaPredicted RBP13.94□□□□□ -0.18
USP3-205ENST00000557884 BDKRB1P46663 353 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 LIMK2P53671 638 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 ZFP36L1Q07352 338 aaKnown RBP13.94□□□□□ -0.18
USP3-205ENST00000557884 SQSTM1Q13501 440 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 FAM153CQ494X1 144 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 FAM45BPQ6NSW5 357 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 TMEM71Q6P5X7 295 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 WDR74Q6RFH5 385 aaPredicted RBP13.94□□□□□ -0.18
USP3-205ENST00000557884 PAQR3Q6TCH7 311 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 UNC5DQ6UXZ4 953 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 CYS1Q717R9 158 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 TBC1D21Q8IYX1 336 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 CACTIN-AS1Q8N1I8 211 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 LMNTD1Q8N9Z9 388 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 OR4D9Q8NGE8 314 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 OR5K2Q8NHB8 316 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 UHMK1Q8TAS1 419 aaKnown RBP13.94□□□□□ -0.18
USP3-205ENST00000557884 FAM45AQ8TCE6 357 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 ZFPM2Q8WW38 1151 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 FOPNLQ96NB1 174 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 STRADBQ9C0K7 418 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 SRMSQ9H3Y6 488 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 RHOJQ9H4E5 214 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 HRASLS2Q9NWW9 162 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 KLHL42Q9P2K6 505 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 CORO1CQ9ULV4 474 aaPredicted RBP13.94□□□□□ -0.18
USP3-205ENST00000557884 ICKQ9UPZ9 632 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 VWA7Q9Y334 891 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 FREM2Q5SZK8 3169 aa13.94□□□□□ -0.18
USP3-205ENST00000557884 ZFC3H1O60293 1989 aaKnown RBP13.93□□□□□ -0.18
USP3-205ENST00000557884 FAM221BA6H8Z2 402 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 OR5K3A6NET4 321 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 TRABD2BA6NFA1 517 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 RPN2P04844 631 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 TPBGLP0DKB5 382 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 THRAP10827 490 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 FDXRP22570 491 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 ATP5DP30049 168 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 CCKBRP32239 447 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 PHBP35232 272 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 GP5P40197 560 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 PDAP1Q13442 181 aaKnown RBP13.93□□□□□ -0.18
USP3-205ENST00000557884 CAMK2BQ13554 666 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 ZNF460Q14592 562 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 CLPPQ16740 277 aaPredicted RBP13.93□□□□□ -0.18
USP3-205ENST00000557884 CCSMST1Q4G0I0 132 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 C3orf38Q5JPI3 329 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 UGT3A1Q6NUS8 523 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 ARMC6Q6NXE6 501 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 KLHL35Q6PF15 583 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 FAM92BQ6ZTR7 304 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 PIWIL4Q7Z3Z4 852 aaKnown RBP13.93□□□□□ -0.18
USP3-205ENST00000557884 OOSP2Q86WS3 158 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 PLXDC1Q8IUK5 500 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 RELL1Q8IUW5 271 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 DCUN1D3Q8IWE4 304 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 VPS39Q96JC1 886 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 CPNE1Q99829 537 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 DPYSL5Q9BPU6 564 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 TFB2MQ9H5Q4 396 aaKnown RBP13.93□□□□□ -0.18
USP3-205ENST00000557884 ANKZF1Q9H8Y5 726 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 POLG2Q9UHN1 485 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 MTO1Q9Y2Z2 717 aaKnown RBP13.93□□□□□ -0.18
USP3-205ENST00000557884 CHD8Q9HCK8 2581 aa13.93□□□□□ -0.18
USP3-205ENST00000557884 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
USP3-205ENST00000557884 GSAPA4D1B5 854 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 TMX2-CTNND1H3BSU7 103 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 BTN3A3O00478 584 aa13.92□□□□□ -0.18
USP3-205ENST00000557884 KIF1CO43896 1103 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms