RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ANKRD66B4E2M5 251 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 PPM1DO15297 605 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 AVILO75366 819 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 RFPL1O75677 317 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 STK17BO94768 372 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 DLGAP3O95886 979 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 HOXC4P09017 264 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-230ENST00000557427 CA4P22748 312 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 RAB15P59190 212 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 MC2RQ01718 297 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 MPP2Q14168 576 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 GALNT3Q14435 633 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 EFTUD2Q15029 972 aaKnown RBP eCLIP12.27□□□□□ -0.451e-8■■■■■ 30.9
SHMT2-230ENST00000557427 PCSK7Q16549 785 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 QPCTQ16769 361 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 TEX44Q53QW1 395 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 STEAP4Q687X5 459 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 ITPRIPL1Q6GPH6 555 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 DOK6Q6PKX4 331 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 ANKRD42Q8N9B4 389 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 Q8NA96 180 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 SPATA22Q8NHS9 363 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 DENND1AQ8TEH3 1009 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 AP2M1Q96CW1 435 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 RNF31Q96EP0 1072 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 CFAP36Q96G28 342 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 MAGEB18Q96M61 343 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 TEFMQ96QE5 360 aaKnown RBP12.27□□□□□ -0.45
SHMT2-230ENST00000557427 AGAP2Q99490 1192 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 NAT9Q9BTE0 207 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 MLPHQ9BV36 600 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-230ENST00000557427 RIOK2Q9BVS4 552 aaKnown RBP12.27□□□□□ -0.45
SHMT2-230ENST00000557427 CARS2Q9HA77 564 aaKnown RBP12.27□□□□□ -0.45
SHMT2-230ENST00000557427 PHPT1Q9NRX4 125 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-230ENST00000557427 KCTD5Q9NXV2 234 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 UBP1Q9NZI7 540 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 PDP2Q9P2J9 529 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 KCND3Q9UK17 655 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
SHMT2-230ENST00000557427 OAS3Q9Y6K5 1087 aaKnown RBP12.27□□□□□ -0.45
SHMT2-230ENST00000557427 IGHV1OR21-1A0A087WYE8 117 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 C1orf232A0A0U1RR37 186 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 FOXO6A8MYZ6 492 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 F5H423 210 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 PSMD11O00231 422 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 TNFRSF10CO14798 259 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 PSMD3O43242 534 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 TYROBPO43914 113 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 SUN1O94901 812 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 ZWINTO95229 277 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 FUCA1P04066 466 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 CEACAM5P06731 702 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 INHBAP08476 426 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 PIRTP0C851 137 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 MYCLP1P12525 358 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 PSMB4P28070 264 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 RPL26P61254 145 aaKnown RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 UNC5AQ6ZN44 842 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 PID1Q7Z2X4 250 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 SLC26A11Q86WA9 606 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 KLHDC8BQ8IXV7 354 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 SLC34A3Q8N130 599 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 GSDMBQ8TAX9 411 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 PTCD2Q8WV60 388 aaKnown RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 IMP4Q96G21 291 aaKnown RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 POM121Q96HA1 1249 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 SEC16BQ96JE7 1060 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 TEX101Q9BY14 249 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 ADGRE3Q9BY15 652 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 SLC25A51Q9H1U9 297 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 GBA3Q9H227 469 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 PLAC1Q9HBJ0 212 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 GLOD4Q9HC38 313 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 LUZP4Q9P127 313 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 KLHL8Q9P2G9 620 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 RPL26L1Q9UNX3 145 aaKnown RBP12.26□□□□□ -0.45
SHMT2-230ENST00000557427 POLHQ9Y253 713 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 ST14Q9Y5Y6 855 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 IKBKGQ9Y6K9 419 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 RPS6KL1Q9Y6S9 549 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 DNHD1Q96M86 4753 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 MED13LQ71F56 2210 aa12.26□□□□□ -0.45
SHMT2-230ENST00000557427 CROCCQ5TZA2 2017 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 A0A1W2PPM1 405 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 ARHGAP10A1A4S6 786 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 PRSS38A1L453 326 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 SDR42E2A6NKP2 422 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 FAM159BA6NKW6 160 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 INPP4BO15327 924 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 PMPCBO75439 489 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 ASMTLO95671 621 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 MT-CYBP00156 380 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-230ENST00000557427 ZNF30P17039 623 aa12.25□□□□□ -0.45
SHMT2-230ENST00000557427 GPR3P46089 330 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms