RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TDRD12Q587J7 1177 aaKnown RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 ZNF789Q5FWF6 425 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 Q5PR19 223 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 C1orf189Q5VU69 101 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 KIRREL2Q6UWL6 708 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 C8orf86Q6ZUL3 223 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 ACAD11Q709F0 780 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 RRAGAQ7L523 313 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 LRRC75A-AS1Q8N1F1 130 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 UMODL1-AS1Q8N2C9 162 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 WDTC1Q8N5D0 677 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 ZNF417Q8TAU3 575 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 DENND1AQ8TEH3 1009 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 FAM222BQ8WU58 562 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 HDAC10Q969S8 669 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 SNX21Q969T3 373 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 PWWP2AQ96N64 755 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 ZNF587Q96SQ5 575 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 RIOK2Q9BVS4 552 aaKnown RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 CINPQ9BW66 212 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 GTPBP4Q9BZE4 634 aaKnown RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 NOL6Q9H6R4 1146 aaKnown RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 UPF2Q9HAU5 1272 aaKnown RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 NPHS2Q9NP85 383 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 PTGFRNQ9P2B2 879 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 TEKT2Q9UIF3 430 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 NXT1Q9UKK6 140 aaKnown RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 DNPEPQ9ULA0 475 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 CNTN6Q9UQ52 1028 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 SMC3Q9UQE7 1217 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 DNAJC16Q9Y2G8 782 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 PCYT1BQ9Y5K3 369 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-245ENST00000556958 PKD1L1Q8TDX9 2849 aa5.53□□□□□ -1.52
ATXN3-245ENST00000556958 A0A0G2JK05 382 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 GSAPA4D1B5 854 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 OR6C74A6NCV1 312 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 NPIPB15A6NHN6 443 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 ARHGAP42A6NI28 874 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 J3KR12 359 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 CLDN4O14493 209 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 PMM2O15305 246 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 KLRC4O43908 158 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 OR2B3O76000 313 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 WISP2O76076 250 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 BMP10O95393 424 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 WDPCPO95876 746 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 ERBB2P04626 1255 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 MYL1P05976 194 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF8P17098 575 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 KRT9P35527 623 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 RGRP47804 291 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 DAZAP2Q15038 168 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 SLC5A12Q1EHB4 618 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF766Q5HY98 468 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 ABHD17BQ5VST6 288 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 TTI2Q6NXR4 508 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 C11orf96Q7Z7L8 435 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 LRRTM4Q86VH4 590 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 GALNT12Q8IXK2 581 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 FAM98AQ8NCA5 519 aaKnown RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 OR11G2Q8NGC1 345 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 FBF1Q8TES7 1133 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 KAT5Q92993 513 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 FKBP10Q96AY3 582 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 LRRC46Q96FV0 321 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 Q96MF0 132 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 MCCC1Q96RQ3 725 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 AGAP2Q99490 1192 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 TIMM29Q9BSF4 260 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 NAA15Q9BXJ9 866 aaKnown RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 FAM83DQ9H4H8 585 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 WDR54Q9H977 334 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 TRIM39Q9HCM9 518 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 FAM207AQ9NSI2 230 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 ATXN10Q9UBB4 475 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 SLC23A2Q9UGH3 650 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 CNOT6Q9ULM6 557 aaKnown RBP5.52□□□□□ -1.53
ATXN3-245ENST00000556958 CDYLQ9Y232 598 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 PPIL1Q9Y3C6 166 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 HS3ST3B1Q9Y662 390 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 FER1L5A0AVI2 2057 aa5.52□□□□□ -1.53
ATXN3-245ENST00000556958 RGSL1A5PLK6 1076 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 ADARB2-AS1A8MUL3 147 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 FAM72CH0Y354 149 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 CHUKO15111 745 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 SLC16A3O15427 465 aaKnown RBP5.51□□□□□ -1.53
ATXN3-245ENST00000556958 P4HA2O15460 535 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 DDX3YO15523 660 aaKnown RBP5.51□□□□□ -1.53
ATXN3-245ENST00000556958 SMPD2O60906 423 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 CNOT3O75175 753 aaKnown RBP5.51□□□□□ -1.53
ATXN3-245ENST00000556958 GOSR1O95249 250 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 SLC25A14O95258 325 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-245ENST00000556958 SERPINA7P05543 415 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 PRR35P0CG20 571 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 ICAM2P13598 275 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 PVRP15151 417 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 ACPPP15309 386 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 CD53P19397 219 aa5.51□□□□□ -1.53
ATXN3-245ENST00000556958 PTGS2P35354 604 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms