RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 EFCAB8A8MWE9 144 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 STMND1H3BQB6 276 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 POLR1CO15160 346 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-207ENST00000556831 TTI1O43156 1089 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 TTC4O95801 387 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 ESR1P03372 595 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 LIPCP11150 499 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 RPS3P23396 243 aaKnown RBP eCLIP13.72□□□□□ -0.215e-12■■■■■ 31
SLIRP-207ENST00000556831 LEPRP48357 1165 aaKnown RBP13.72□□□□□ -0.21
SLIRP-207ENST00000556831 ATP1A2P50993 1020 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 ARL4CP56559 192 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 TMPRSS3P57727 454 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 CALCOCO2Q13137 446 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 BBS9Q3SYG4 887 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 PRSS42Q7Z5A4 293 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 ARHGAP22Q7Z5H3 698 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 SPACA3Q8IXA5 215 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 TBC1D21Q8IYX1 336 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 OR4E2Q8NGC2 313 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 C16orf45Q96MC5 204 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-207ENST00000556831 FOPNLQ96NB1 174 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 UBL7Q96S82 380 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-207ENST00000556831 ZPBPQ9BS86 351 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 TRIM51Q9BSJ1 452 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 DDA1Q9BW61 102 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 ZNF768Q9H5H4 540 aaKnown RBP13.72□□□□□ -0.21
SLIRP-207ENST00000556831 INTS10Q9NVR2 710 aaKnown RBP13.72□□□□□ -0.21
SLIRP-207ENST00000556831 SOHLH2Q9NX45 425 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 EPHA6Q9UF33 1036 aa13.72□□□□□ -0.21
SLIRP-207ENST00000556831 SLC5A10A0PJK1 596 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 TLCD2A6NGC4 264 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 FGF3P11487 239 aaPredicted RBP13.71□□□□□ -0.21
SLIRP-207ENST00000556831 CHRM3P20309 590 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 FMO4P31512 558 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 SHMT2P34897 504 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 PTGIRP43119 386 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 MAGEA3P43357 314 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 PRKG2Q13237 762 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 HIF1AQ16665 826 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 TYSND1Q2T9J0 566 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 TTLL9Q3SXZ7 439 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 TMTC4Q5T4D3 741 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 NAPRTQ6XQN6 538 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 TMEM135Q86UB9 458 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 KCNMB4Q86W47 210 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 AMIGO1Q86WK6 493 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 CILP2Q8IUL8 1156 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 RAB42Q8N4Z0 105 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 SIDT2Q8NBJ9 832 aaKnown RBP13.71□□□□□ -0.21
SLIRP-207ENST00000556831 PHC3Q8NDX5 983 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 OR52E1Q8NGJ3 308 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 RNF31Q96EP0 1072 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 PPANQ9NQ55 473 aaKnown RBP13.71□□□□□ -0.21
SLIRP-207ENST00000556831 OCIAD1Q9NX40 245 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 CRYL1Q9Y2S2 319 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 PCDHGA3Q9Y5H0 932 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 CFAP46Q8IYW2 2715 aa13.71□□□□□ -0.21
SLIRP-207ENST00000556831 MGAQ8IWI9 3026 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 FAM187AA6NFU0 413 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 IQCF5A8MTL0 148 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 C2orf74A8MZ97 194 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 C9orf172C9J069 976 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 POLR2CP19387 275 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-207ENST00000556831 CDH3P22223 829 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 ARNTP27540 789 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 CCR7P32248 378 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 ARCN1P48444 511 aaKnown RBP13.7□□□□□ -0.22
SLIRP-207ENST00000556831 ITGA8P53708 1063 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 MC2RQ01718 297 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 DHX9Q08211 1270 aaKnown RBP13.7□□□□□ -0.22
SLIRP-207ENST00000556831 SRSF6Q13247 344 aaKnown RBP13.7□□□□□ -0.22
SLIRP-207ENST00000556831 CRYMQ14894 314 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 ZNF658BQ4V348 819 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-207ENST00000556831 SPANXN3Q5MJ09 141 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 PLEKHS1Q5SXH7 462 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 ANKS6Q68DC2 871 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 KMT5CQ86Y97 462 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 SLC22A15Q8IZD6 547 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 CARFQ8N187 725 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 SPATA4Q8NEY3 305 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 OR5AR1Q8NGP9 310 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 OR5K2Q8NHB8 316 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 CFAP61Q8NHU2 1237 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 LPGAT1Q92604 370 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 ZNF592Q92610 1267 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 NRTNQ99748 197 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 P2RY12Q9H244 342 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 TFB2MQ9H5Q4 396 aaKnown RBP13.7□□□□□ -0.22
SLIRP-207ENST00000556831 CLMPQ9H6B4 373 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 FANCEQ9HB96 536 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 PDE7BQ9NP56 450 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 IL1RAPL1Q9NZN1 696 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 FOXJ2Q9P0K8 574 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 ACSL6Q9UKU0 697 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 UTP11Q9Y3A2 253 aaKnown RBP13.7□□□□□ -0.22
SLIRP-207ENST00000556831 PTPRQQ9UMZ3 2332 aa13.7□□□□□ -0.22
SLIRP-207ENST00000556831 KIF2AO00139 706 aaPredicted RBP13.69□□□□□ -0.22
SLIRP-207ENST00000556831 SEC31AO94979 1220 aaKnown RBP13.69□□□□□ -0.22
SLIRP-207ENST00000556831 TUBB4AP04350 444 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms